| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0090 |
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| Symbol | aroE |
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| ID | 5191231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 95794 |
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| End bp | 96618 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584531 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001265449 |
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| Protein GI | 148545347 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGT ACGTCGTTTT TGGTAACCCC ATCGGCCACA GCAAGTCGCC GCTGATCCAC
CGCCTGTTCG CCGAGCAGAC CGGTCAGGAC CTGAAATATG CCACGCTGCT GGCGCCGTTG
GACGAGTTCA GCGACTGCGC GCGCGGCTTC TTCAAGCAAG GCAGTGGCGG TAATGTCACC
GTGCCGTTCA AGGAAGAGGC CTACCGCCTG TGCGACAGCC TGACCCCGCG TGCCCAGCGC
GCTGGCGCAG TGAACACGCT GAGCAAGCTG GCTGATGGTA CCCTGCAGGG CGACAACACC
GACGGCGCTG GCCTGGTGCG CGACCTGACG GTGAATGCCG GGGTCGAGCT GGCGGGCAAG
CGCATTCTCA TCCTCGGTGC CGGTGGCGCC GTGCGCGGCG TGCTGGAGCC TATTCTGGCG
CACAAGCCGC AGTCGCTGGT GATTGCCAAC CGTACCGTGG AAAAGGCCGA GCAGCTGGCG
CGCGAGTTCG ATGAACTGGG GCCGGTGGTG GCCAGCGGGT TTGCCTGGTT GCAGGAGCCT
GTGGATGTGA TCATCAACGC CACCTCGGCG AGCCTGGCCG GGGAGTTGCC GCCTATTGCC
GACAGCCTGG TCGAGGCGGG TCGTACGGTT TGCTACGACA TGATGTATGG CAAGGAGCCG
ACGCCGTTTT GCCAGTGGGC TACCAAGTTG GGGGCTGCCA AGGTACTGGA TGGGTTGGGG
ATGCTGGCCG AGCAGGCGGC TGAGGCCTTC TTTATCTGGC GTGGCGTGAG GCCGGATACG
GCGCCGGTGT TGGCTGAACT GCGCCGGCAA CTCGCTCGGG GCTGA
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| Protein sequence | MDQYVVFGNP IGHSKSPLIH RLFAEQTGQD LKYATLLAPL DEFSDCARGF FKQGSGGNVT
VPFKEEAYRL CDSLTPRAQR AGAVNTLSKL ADGTLQGDNT DGAGLVRDLT VNAGVELAGK
RILILGAGGA VRGVLEPILA HKPQSLVIAN RTVEKAEQLA REFDELGPVV ASGFAWLQEP
VDVIINATSA SLAGELPPIA DSLVEAGRTV CYDMMYGKEP TPFCQWATKL GAAKVLDGLG
MLAEQAAEAF FIWRGVRPDT APVLAELRRQ LARG
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