Gene Pput_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0042 
Symbol 
ID5194171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp43853 
End bp44179 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content48% 
IMG OID640584483 
Producthypothetical protein 
Protein accessionYP_001265401 
Protein GI148545299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000312545 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACTA CTGTATCAGC GATCGCCGTG TTTTTGCTCT TTACATCACT AACAGCCAAT 
GCCCAAAGCG GTATGGAGAT CAATAAACGC ATCGAGCGTA CTGCTAGAGA GGCTACAGCG
GATTATGCTC AACGCGTAAA AAAGCCCATG CCTCAACTAG AAGACTACGC CTATGGCATG
GACCTGGACG TTGGTAAGTT GGTGTATGTA TCACCCAGTG TGCGGTACTG CGGTAATGTA
AGAAGCATGA TGACCTACGA AGACTCGAAA GGCGAACTGC ACATGGTTCG CTACCTGGTG
AAGGGCGAGT GTGTTAATAG CCGTTAA
 
Protein sequence
MNTTVSAIAV FLLFTSLTAN AQSGMEINKR IERTAREATA DYAQRVKKPM PQLEDYAYGM 
DLDVGKLVYV SPSVRYCGNV RSMMTYEDSK GELHMVRYLV KGECVNSR