| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0034 |
|---|
| Symbol | |
|---|
| ID | 5192251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 36650 |
|---|
| End bp | 37015 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640584475 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265393 |
|---|
| Protein GI | 148545291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.955781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000290254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCCTG ACATTCGCTT TTCAGGGCGA GCTATGGGGG CCACTCAAGA CGGCTATCTT
TTGCCTGGCA CCAATGAAAA GGCCCTCAAT ATTGAGGGCC TTAAATTCAA TGCGGATCCG
TCACGCGGGC ATTTTTTGCA GCTGTCGAAC TCGATCATGG ACCACAAATT TAATGATTCC
TTTGACATCG TTGGTGCAGT TTTCAAAGGC AAGGCGCGAT ACCACCTGGC GACCCTCCTT
CAGAATCAGC GCCCCGATCA ACTCGTCGAC GAAGGACTGA GTGACATCGT TCCCAGCGAA
ATCTATGACA ACGCTCTCAC CACTGCTGAG CGAGCGTTCG ATTTCGGTAC GGTAGGGGAT
CGCTGA
|
|---|
| Protein sequence | MSPDIRFSGR AMGATQDGYL LPGTNEKALN IEGLKFNADP SRGHFLQLSN SIMDHKFNDS
FDIVGAVFKG KARYHLATLL QNQRPDQLVD EGLSDIVPSE IYDNALTTAE RAFDFGTVGD
R
|
|---|
| |