| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5125 |
|---|
| Symbol | |
|---|
| ID | 6114127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5684141 |
|---|
| End bp | 5685556 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641624949 |
|---|
| Product | pyruvate carboxylase subunit A |
|---|
| Protein accession | YP_001751970 |
|---|
| Protein GI | 170724282 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.638532 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAAAAA AAATCCTGAT CGCCAACCGG GGTGAAATCG CAGTCCGCAT CGTGCGTGCC
TGCGCCGAGA TGGGCATTCG CTCTGTCGCG ATCTATTCCG ACGCCGACCG CCACGCCTTG
CACGTCAAGC GCGCTGACGA GGCCTACAGC ATTGGTGCCG AGCCGCTGGC TGGCTACCTG
AACCCGCGCA AGCTGGTGAA TCTTGCTGTG GAAACCGGCT GTGATGCCCT GCACCCGGGC
TACGGTTTCC TGTCGGAAAA CGCGGAGCTA GCAGAGATCT GCGCCGAGCG CGGTATCAAG
TTCATCGGCC CTGCCGCTGA GGTCATTCGC CGAATGGGCG ACAAGACAGA AGCGCGCCGC
ACCATGATTC AGGCCGGCGT GCCCGTTACC CCAGGTACCG AAGGCAACGT TGCCGACATC
CACGAAGCCC TTAGCGAAGG CGAGCGTATC GGTTACCCGG TGATGCTCAA GGCCACCTCC
GGCGGTGGCG GCCGGGGCAT TCGCCGTTGC AACAGCCGTG AAGAGCTGGA GCAGAACTTC
CCCCGTGTCA TCTCCGAAGC TACCAAGGCC TTCGGTTCAG CGGAAGTGTT CCTGGAAAAG
TGTATCGTCA ACCCCAAGCA CATCGAGGCG CAGATCCTGG GCGACAGCTT CGGCAATGTG
GTGCACCTGT TCGAGCGTGA TTGCTCGATC CAGCGCCGCA ACCAGAAGCT CATCGAAATT
GCCCCAAGCC CCCAACTCAC TCCCGAACAG CGTGCCTATA TCGGTGACCT GGCGGTCCGG
GCAGCCAAGG CTGTGAACTA CGAGAACGCC GGTACTGTGG AGTTCCTGCT CGCCGATGGC
GAGGTGTACT TCATGGAAAT GAATACTCGC GTGCAGGTCG AGCACACCAT CACCGAAGAA
ATTACCGGTA TCGACGTGGT CCGCGAGCAG ATCCGCATCG CCTCGGGCCT GCCGCTGTCA
GTCAAGCAGG AAGACATTCA GCACCGCGGC TACGCGTTGC AGTTCCGCAT CAACGCTGAA
GACCCGAAGA ACAACTTCCT GCCCAGTTTC GGCAAGATCA CCCGTTACTA CGCCCCCGGC
GGCCCGGGTG TGCGCACCGA TACAGCGATC TACACCGGTT ACACCATCCC ACCGTTCTAT
GACTCCATGT GCCTGAAACT GGTGGTGTGG GCGTTGACCT GGGAAGAAGC CATGGACCGT
GGCCTACGGG CCCTGGACGA CATGCGCGTG CAAGGGGTGA AGACCACTGC CGCGTACTAC
CAGGAAATCC TGCGCAACCC AGAATTCCGT AGCGGCCAGT TCAACACCAG CTTCGTCGAA
AGCCACCCTG AACTGACCAA CTACTCGATC AAGCGCAAAC CCGAAGAGCT GGCCCTGGCC
ATCGCCGCCG CCATCGCCGC CCACGCAGGC CTATGA
|
|---|
| Protein sequence | MIKKILIANR GEIAVRIVRA CAEMGIRSVA IYSDADRHAL HVKRADEAYS IGAEPLAGYL
NPRKLVNLAV ETGCDALHPG YGFLSENAEL AEICAERGIK FIGPAAEVIR RMGDKTEARR
TMIQAGVPVT PGTEGNVADI HEALSEGERI GYPVMLKATS GGGGRGIRRC NSREELEQNF
PRVISEATKA FGSAEVFLEK CIVNPKHIEA QILGDSFGNV VHLFERDCSI QRRNQKLIEI
APSPQLTPEQ RAYIGDLAVR AAKAVNYENA GTVEFLLADG EVYFMEMNTR VQVEHTITEE
ITGIDVVREQ IRIASGLPLS VKQEDIQHRG YALQFRINAE DPKNNFLPSF GKITRYYAPG
GPGVRTDTAI YTGYTIPPFY DSMCLKLVVW ALTWEEAMDR GLRALDDMRV QGVKTTAAYY
QEILRNPEFR SGQFNTSFVE SHPELTNYSI KRKPEELALA IAAAIAAHAG L
|
|---|
| |