Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4949 |
Symbol | |
ID | 6113941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5469108 |
End bp | 5469935 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641624763 |
Product | 3'(2'),5'-bisphosphate nucleotidase |
Protein accession | YP_001751794 |
Protein GI | 170724106 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.19378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000193333 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGACC AGCAACTGAT GCATGAAGTG GTGAAACTGG CCGGCTTGGC AGGGCAGGCG ATCCTGCCGT TCTGGCGCGC CGACGTGGCG GTGACCAACA AGGCGGATGA TTCGCCAGTG ACCGCCGCCG ACCTGGCCGC ACACCGGGTT ATCGCCGACG GCCTGCAGGC GCTGGCGCCG CAGATCCCTG TGCTGTCCGA GGAAGACTGC AATATCCCGT TGGCCGAGCG CCAGGGCTGG CAGCGCTGGT GGCTGGTCGA CCCTTTGGAC GGTACCAAGG AGTTCATCGC GGGTAGCGAA GAGTTCACCG TCAATATCGC GCTGATCGAA AACGGCGAAG TTGTGTTTGG CGTGGTTTCG ATGCCGACCA GCGGCCGCTG CTATTTCGGT GGCCAAGGCC TGGGCGCCTG GCGGGCAGAG GCAGGCGGCG AGCCGCAACC GGTCCAGGTC CGTAACGCGC CACCTGCCGA TGGTCGTTTC ACCGTGGTGG CCAGCCGTCG CCATTCCAGC CCACAGCAGG AAGCGTTGCT GTCTGGGCTC GGCGCTGCTG TCGGTGAGCT GGAGCTGGCC AATATCGGCA GCTCGCTCAA GTTCTGCCTG CTGGCCGAAG GCAGCGCCGA CTGCTACCCG CGCCTGGCGC CGACCTCGCA GTGGGACACC GCTGCGGCGC AAGGCGTGCT GGAAGGGGCA GGCGGCGAAG TGATCGGCGT GGACGGCCAG CCGTTCCGCT ACCCGCCACG CGAATCCCTG CTCAACCCCT TCTTCCTCGC CTTGCCCGCA GCTGCCAGCT GGCGTCAGGC GCTAATCCAG CTCGCCTCAG CGATGTAA
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Protein sequence | MNDQQLMHEV VKLAGLAGQA ILPFWRADVA VTNKADDSPV TAADLAAHRV IADGLQALAP QIPVLSEEDC NIPLAERQGW QRWWLVDPLD GTKEFIAGSE EFTVNIALIE NGEVVFGVVS MPTSGRCYFG GQGLGAWRAE AGGEPQPVQV RNAPPADGRF TVVASRRHSS PQQEALLSGL GAAVGELELA NIGSSLKFCL LAEGSADCYP RLAPTSQWDT AAAQGVLEGA GGEVIGVDGQ PFRYPPRESL LNPFFLALPA AASWRQALIQ LASAM
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