| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4929 |
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| Symbol | |
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| ID | 6113920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5443953 |
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| End bp | 5444648 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624742 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001751774 |
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| Protein GI | 170724086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0205937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000789331 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCG ACCTGCACGG ATTCGGTCCG GCCCTGGCGG CTGGCACCCT GATGACCGTA
AAACTGGCGC TTTGCGCCTT GCTGCTGGGG CTGGTCCTGG GCCTGCTCGG CGCCCTGGCC
AAAACCTCCC CGCTCAAGCC ACTGCAATGG CTCGGCGGCT TCTACTCGAC CCTGGTTCGC
GGCGTGCCCG AACTGCTCTG GGTCCTGCTT ATCTATTTCG GCACCGTCGG CCTGATGAAC
AGCCTCGGCG AAGCCCTCAA CATGCCTGGC CTGGAACTCA GTGCCTTCGC CGCCGGCGTG
ATCGCCCTGG GCCTGTGCTT CGGCGCCTAC GCCACTGAAG TATTCCGTGG CGCCATCCTC
GCGATCCCCA AGGGCCACCG TGAAGCCGGC CTGGCGCTGG GCCTGTCCAA AGCGCGCATC
CTGTCGCGGA TCATCCTCCC GCAAATGTGG CGCATCGCCC TGCCGGGCCT TGGCAACCTG
TTCATGATCC TGATGAAGGA CACCGCCCTG GTGTCGGTGA TCGGCCTGGA AGAAATCATG
CGCCACGCGC AGATCGGCGT GACCGTGACC AAAGAGCCGT TCACCTTCTA CATGGTCGCG
GCCTGCATCT ACCTGGGCCT GACCGTGGTC GCCATGACCG GCATGCACTT CATGGAAAAA
CGCGCCGCTC GCGGCTTTGC GAGGGCCGAA CAATGA
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| Protein sequence | MNIDLHGFGP ALAAGTLMTV KLALCALLLG LVLGLLGALA KTSPLKPLQW LGGFYSTLVR
GVPELLWVLL IYFGTVGLMN SLGEALNMPG LELSAFAAGV IALGLCFGAY ATEVFRGAIL
AIPKGHREAG LALGLSKARI LSRIILPQMW RIALPGLGNL FMILMKDTAL VSVIGLEEIM
RHAQIGVTVT KEPFTFYMVA ACIYLGLTVV AMTGMHFMEK RAARGFARAE Q
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