| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4759 |
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| Symbol | rplA |
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| ID | 6113741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5244788 |
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| End bp | 5245483 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641624563 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001751604 |
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| Protein GI | 170723916 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00425214 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGC TGACCAAGCG CCAAAAGGCT ATTGCTTCGA AAGTCGAAGC TGGCAAAGTT
TACAACTTCG AAGACGCAGC TGCGCTGCTG GCCGAACTGT CCACCGTGAA GTTCAGCGAG
TCTTTCGACG TTGCCGTCAA CCTCGGTGTT GACCCGCGTA AATCCGACCA GGTCGTTCGT
AGCGCTACCG TGCTGCCACA CGGCACTGGC AAGACCGTAC GCGTTGCCGT CTTCACCCAG
GGCCCAGCTG CTGAGGCCGC TCTGGCTGCC GGCGCTGACC GTGTAGGTAT GGACGATCTG
GCTGCCGAAA TGAAGGGCGG CGACCTGAAC TATGACGTCG TCATCGCATC GCCTGATGCA
ATGCGCGTTG TGGGTCAGTT GGGTCAGGTT CTGGGTCCTC GCGGCCTGAT GCCTAACCCG
AAAGTCGGTA CTGTGACTCC TGATGTTGCC ACGGCTGTGA AAAACGCCAA GGCCGGTCAG
GTTCGCTATC GCACCGACAA AAACGGTATC ATCCACACCT CCGTTGGCAA GGTCGGCTTC
GAAGCTGGCA AGCTGAAGGA AAACGTTGAA GCCCTGATCG CTGATCTGAA GCGTATCAAA
CCGGCTTCTT CGAAAGGTAT CTACGTCAAG CGCGTTACCC TGAGCACCAC TATGGGCCCA
GGTCTGGTCA TCGATCAGAG CTCGCTGAAC GCGTAA
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| Protein sequence | MAKLTKRQKA IASKVEAGKV YNFEDAAALL AELSTVKFSE SFDVAVNLGV DPRKSDQVVR
SATVLPHGTG KTVRVAVFTQ GPAAEAALAA GADRVGMDDL AAEMKGGDLN YDVVIASPDA
MRVVGQLGQV LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VRYRTDKNGI IHTSVGKVGF
EAGKLKENVE ALIADLKRIK PASSKGIYVK RVTLSTTMGP GLVIDQSSLN A
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