| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4571 |
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| Symbol | |
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| ID | 6113552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5047999 |
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| End bp | 5048685 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624377 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001751420 |
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| Protein GI | 170723732 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000728936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00656486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAATC CACGAACTGC CCTCATCATC GGCGCCTCCC GCGGGCTTGG CCTTGGCCTG
GTGCAGCGCC TTCACGACGA TGGCTGGAAA ATTACGGCCA CGGTGCGTGA CCCGCAAAAA
CCCGGCGCTC TCGGCGAAGT GCCAGGGGTA CGCGTCGAGC AGTTGGAAAT GAACGACACC
GCACAGCTCG ATGGCCTGAA GCAGCGCCTG CAAGGCGAAG TGTTCGACTT GGTGTTCGTC
AATGCCGGCG TCATGGGGCC GCTGCCGCAG GACCTGGAAA CCGTACAGCG CAATGAAATC
GGCGACCTGT TCATGACCAA CGCCGTGGCG CCGATCCGCG TCGCCCGCCG CCTGGCCGGC
CAAGTGCGTG AAGGCTCGGG CGTGTTGGCG TTCATGAGCT CGATCCTGGG TAGCGTGACC
ATACCCGACG GTGGAGAGGT CTGCCTGTAC AAGGCGAGCA AGGCCGCCCT GAACTCGATG
ATCAACAGCT TCGTGGTCGA CCTGCAGCGA CCAGACCTTT GCGTATTGGC CATGCACCCG
GGTTGGGTAA AGACCGACAT GGGCGGCGAG AACGCCGAAA TCGACGTACT CACCAGTACC
CAGGGCATGC TCGAACAGAT CAAAGCGCAA AGCGGCAACG GCGGGCTGCG CTTCATCAAC
TACAAGGGCG AATCGCTGGT CTGGTGA
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| Protein sequence | MTNPRTALII GASRGLGLGL VQRLHDDGWK ITATVRDPQK PGALGEVPGV RVEQLEMNDT
AQLDGLKQRL QGEVFDLVFV NAGVMGPLPQ DLETVQRNEI GDLFMTNAVA PIRVARRLAG
QVREGSGVLA FMSSILGSVT IPDGGEVCLY KASKAALNSM INSFVVDLQR PDLCVLAMHP
GWVKTDMGGE NAEIDVLTST QGMLEQIKAQ SGNGGLRFIN YKGESLVW
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