| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4372 |
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| Symbol | |
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| ID | 6113342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4814251 |
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| End bp | 4815138 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624167 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001751221 |
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| Protein GI | 170723533 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTA AGCACTTTAT CCAAATCACC AAACCGGGGA TCATTTTCGG TAACGTGCTT
TCCGTGGCAG GCGGTTTCTT CCTTGCCTCG AAGGGCCATG TAGACTTCGC CCTGTTCCTG
GCGGTGGTCA TAGGTACGTC CCTGGTGGTT GCGTCCGGTT GTGTGTTCAA CAACTGCATC
GACCGCGACA TCGATATCAA GATGGAACGT ACCAAGAACC GCGTCATGGT CCAGGGCGGC
ATGTCGCTGA CCCTCGCGCT GGTCTACGCC ACCCTCCTCG GGGTGGCGGG CTTCAGCCTG
CTGTATGTCC AGGCCAACCC GCTGTCGGCG TTCTGTGCGC TGATCGGGTT CATCGTCTAC
GTCGGTTTCT ACAGCCTCTG GCTGAAGCGC AAATCGGTGC ACGGCACCTT GGTTGGCAGC
CTGTCCGGTG CCATGCCTCC GGTGATCGGT TACTGCGCCG TTAGCAACAG CTTCGACCTG
GCGGCAGTGA CCCTGCTGGT GATGTTCAGC CTGTGGCAGA TGCCGCACAG CTTCGCGATC
GCAATCTTCC GCTTCAAGGA TTACAGCGCC GCCAACATTC CGGTCCTGCC GGTGGCACGC
GGTATTCTTG CGGCCAAGAA GCAGATCGTG CTGTACGTGC TGGCCTTCGT GCTCGCTACC
CTGATGCTCA CCCTCGGCGG TTATGCCGGC CTCGGCTACC TGGCCGTGGC AGCTGCCATG
GGCCTGTACT GGCTGTACAT GGCCTGGGGT GGTTACAAGG CCGAGGACGA CAGCAAGTGG
GCCCGCAAGG TATTCGGCTT CTCCATCCTC ACCGTTACCG CCCTGAGCGT GATGATGGGT
GTGGACAGCC AGACCGCTGC GGACGTGCTG ATGACCTACG CACGCTGA
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| Protein sequence | MSVKHFIQIT KPGIIFGNVL SVAGGFFLAS KGHVDFALFL AVVIGTSLVV ASGCVFNNCI
DRDIDIKMER TKNRVMVQGG MSLTLALVYA TLLGVAGFSL LYVQANPLSA FCALIGFIVY
VGFYSLWLKR KSVHGTLVGS LSGAMPPVIG YCAVSNSFDL AAVTLLVMFS LWQMPHSFAI
AIFRFKDYSA ANIPVLPVAR GILAAKKQIV LYVLAFVLAT LMLTLGGYAG LGYLAVAAAM
GLYWLYMAWG GYKAEDDSKW ARKVFGFSIL TVTALSVMMG VDSQTAADVL MTYAR
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