| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4325 |
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| Symbol | ispG |
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| ID | 6113294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4771549 |
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| End bp | 4772658 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641624119 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001751174 |
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| Protein GI | 170723486 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0146763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000610862 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACGGCG AATCTCCGAT CAAACGTCGC GAATCCCGCA AAATCTGGGT CGGCAATGTG
CCGGTGGGTG GTGATGCCCC CATTGCGGTG CAGAGCATGA CCAACACCGA CACCAATGAT
GTCGCCGCCA CCGTGGGCCA GATCCAGCGT CTGGTCGATG CCGGTGTCGA CATCGTCCGT
GTTTCGGTGC CGGACATGGA CGCCGCCGAG GCGTTCGGCA AAATCAAGCA ACTGGTCAGC
GTACCGCTGG TCGCCGATAT CCACTTCGAC TACAAGATCG CATTGCGCGT GGCCGAACTG
GGTGTCGACT GCCTGCGTAT CAACCCGGGC AACATCGGCC GCGAGGACCG TGTTCGTGCT
GTGGTCGACG CCGCTCGTGA CCGTGGCATT CCGATCCGTA TCGGTGTCAA CGCAGGCTCC
CTGGAAAAGG ACCTGCAAAA GAAATATGGC GAGCCGACCC CGGCGGCGCT GGTCGAATCG
GCCCTGCGCC ATGTCGAGCA CCTCGACCGC CTGGATTTCC AGGACTTCAA GGTCAGCGTC
AAGGCCTCCG ACGTGTTCAT GGCCGTCGAA GCCTACCGCT TGCTGGCCAA GCAGATCATC
CAGCCGCTGC ACCTGGGCAT CACCGAGGCC GGTGGGCTGC GCTCCGGCAC GGTGAAATCC
GCCGTCGGCC TCGGTATGCT GCTGGCCGAA GGCATCGGCG ATACCATCCG CATTTCGCTG
GCGGCCGACC CGGTCGAGGA AGTGAAGGTC GGCTACGACA TCCTCAAGTC GCTGCACCTG
CGTTCGCGTG GCATCAACTT CATCGCCTGC CCGAGCTGCT CGCGGCAGAA CTTCGATGTG
GTCAAGACCA TGAACGAACT GGAAGGGCGC CTGGAAGACC TGCTGGTACC GCTGGACGTG
GCGGTGATCG GTTGTGTGGT CAACGGCCCT GGCGAAGCGA AGGAAGCCCA CGTTGGCCTG
ACCGGCGGCA CGCCGAACCT GATCTACATC GACGGCAAGC CGGCGCAGAA ACTGACCAAT
GACAACCTGG TCGATGAGCT GGAAAAGCTC ATCCGCCAGA AAGCGGCCGA AAAGGTCGAG
GCCGACGCGG CGCTGATCGC CCGCGGCTGA
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| Protein sequence | MHGESPIKRR ESRKIWVGNV PVGGDAPIAV QSMTNTDTND VAATVGQIQR LVDAGVDIVR
VSVPDMDAAE AFGKIKQLVS VPLVADIHFD YKIALRVAEL GVDCLRINPG NIGREDRVRA
VVDAARDRGI PIRIGVNAGS LEKDLQKKYG EPTPAALVES ALRHVEHLDR LDFQDFKVSV
KASDVFMAVE AYRLLAKQII QPLHLGITEA GGLRSGTVKS AVGLGMLLAE GIGDTIRISL
AADPVEEVKV GYDILKSLHL RSRGINFIAC PSCSRQNFDV VKTMNELEGR LEDLLVPLDV
AVIGCVVNGP GEAKEAHVGL TGGTPNLIYI DGKPAQKLTN DNLVDELEKL IRQKAAEKVE
ADAALIARG
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