Gene PputW619_4201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4201 
Symbol 
ID6113170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4633007 
End bp4633720 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID641623995 
Product6-phosphogluconolactonase 
Protein accessionYP_001751050 
Protein GI170723362 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATAT CTGAATTGAA TTTGCCGACA TCGGTCAAGG CGCATCAGCT GAATGATGCC 
CGCGTACTTT CGGCAACATT GGCGGCTGAT GTGGCCGAGC GCTTGCGCGC AGCCATCGCC
GCGAAAGGGC GGGCTTGCCT GGTGTTGTCC GGTGGCCGCA GCCCGGTGCC GTTCCTGGAG
AAGCTGGCGA CCGAGGCCCT GGACTGGTCC AAGGTCACCG TCAGCCTGGC CGACGAGCGT
TGGGTGCCGG TGGAGCACGC CGACAGCAAT GCCGGTTTGC TGGCCCGCCA TCTGTTCCAG
GGGGGCGCTG CCAAGGCTCG TTTTGTCGGG CTGTATCAGC AGGCCGAGAA CCTCGACGCG
GCGGCCGCCC AAGCCGACCA GGCATTGGCC GATCTGCCGG CCATCGACGT GCTGGTACTG
GGCATGGGCG ACGATGGTCA TACCGCTTCG CTGTTCCCCG GCAGCCCGAA TCTGGCCGAA
GGCCTGGACC TGAACAGCAC GCGCCGCTGC CTGCCGTTGC TGGCGCCGAG CGTGCCGCAC
CAGCGCCTTT CGCTAACCCG TTCCCTGCTG GCCAGCGCCG CGTTCATCGC GCTGTCCGTG
CAGGGCCCGG GCAAACTCGC TACCCTGCGC GCCGCGCTGG CGGGCAACGA CCTCAATGAA
ATGCCGATTC GCGCCTTTCT TCACGACCCC TTGGACATCT ACTGGTGCCC ATGA
 
Protein sequence
MGISELNLPT SVKAHQLNDA RVLSATLAAD VAERLRAAIA AKGRACLVLS GGRSPVPFLE 
KLATEALDWS KVTVSLADER WVPVEHADSN AGLLARHLFQ GGAAKARFVG LYQQAENLDA
AAAQADQALA DLPAIDVLVL GMGDDGHTAS LFPGSPNLAE GLDLNSTRRC LPLLAPSVPH
QRLSLTRSLL ASAAFIALSV QGPGKLATLR AALAGNDLNE MPIRAFLHDP LDIYWCP