Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4171 |
Symbol | |
ID | 6113140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4599558 |
End bp | 4600217 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641623965 |
Product | type II secretion system protein N |
Protein accession | YP_001751020 |
Protein GI | 170723332 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.245137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC GTGGGCTGCT GTGGGCCGGG CTGGTGTTCA GCCTGACTTT GCTGGTGCAG TTGCCGGCGT CCTGGGTTGC ACTGGGCTTG GGCCTGCCGA TGCATGCGGT CAGCGGCAGC CTGTGGCAGG GGCAGGCGCA GCAGTTCGGG CCTGTCGGGC CCGTGCGCTG GGCCTTGCAG CCTTGGCGCT TGCAGGCCAA CGCACAGCTG GGGTTTCAGG GCCAGGGCTG GCAGTTGCAC GCTGAAGGCT GGCCTTGGCG CTGGCAGTTG GACGTTACCG CACAGGATCA CCAGGCGAGT GTGCAAACGG CCTATCGGCT GGCCGGGCAG TGGCAGGGCA CGCTGCGCCT GCAAGGAGCG GGGCGTCAGT GCCGTACCAG CGAAGGGCGC ATCACGGTCA CCGACCTCGC CTTGAGCGAA CCTTGGTCGC TGGGGTTGGG GCAGGGCTGG GTAGAAATGG ATTGCCGCAC AGGCTTGCGC CTGCATGGGC AGCTGATACA ACAGCGTGAG CATCGTTTGG CGCTGAATGC AGACCTTCTG GGGCGCCACG CAGTGGTGGC GGCCGAAATG CAGCCGGACG CTGCGCTTAC ACCGCTGCTG CGCGCTGCTC GGCTGGTGGG GCCGCAGGCG CTGACGGGGC AGCGGGAGTG GCGTTGGTAA
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Protein sequence | MSRRGLLWAG LVFSLTLLVQ LPASWVALGL GLPMHAVSGS LWQGQAQQFG PVGPVRWALQ PWRLQANAQL GFQGQGWQLH AEGWPWRWQL DVTAQDHQAS VQTAYRLAGQ WQGTLRLQGA GRQCRTSEGR ITVTDLALSE PWSLGLGQGW VEMDCRTGLR LHGQLIQQRE HRLALNADLL GRHAVVAAEM QPDAALTPLL RAARLVGPQA LTGQREWRW
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