Gene PputW619_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4045 
Symbol 
ID6113014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4466680 
End bp4467006 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content63% 
IMG OID641623839 
ProductGPW/gp25 family protein 
Protein accessionYP_001750894 
Protein GI170723206 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0346302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000617415 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGGCA TGGACCGCCG CACCGGCCTG CCACTGGCCG GCGTTGCCCA CCTGCGCCAG 
TCCATCGAAG ACATCCTTGC CACACCGCTG GGCAGCCGTC GCATGCGTCC TGAGTACGGC
AGCCAGTTGC GCCGTTTTGT CGACCTGCCG GTCAACGATG GTTGGAAAAG CGCGGTGCAA
GCGGAAGTCG CCCGTGCATT GGGCCGTTGG GAGCCGCGCT TGCAGCTAGA CCGGGTAAAA
GTTGTGGCGG TGCTTGAGGG GCAGGTCAGC CTGGTCCTAA GTGGACGTTA TCTGGGGGAT
GAAGCAGTAC TGGAGGTACG CTTATGA
 
Protein sequence
MIGMDRRTGL PLAGVAHLRQ SIEDILATPL GSRRMRPEYG SQLRRFVDLP VNDGWKSAVQ 
AEVARALGRW EPRLQLDRVK VVAVLEGQVS LVLSGRYLGD EAVLEVRL