| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4037 |
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| Symbol | |
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| ID | 6113006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4458552 |
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| End bp | 4460405 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641623831 |
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| Product | pyocin R2_PP, tail length determination protein |
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| Protein accession | YP_001750886 |
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| Protein GI | 170723198 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000000016643 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAACA ACTCAGCGGC AACAGATGCG TCGCAACAGC CACTCTCTGA CCCTGAGCAC
GACCGGATCA ACCTTGCGCA GGTATTCAGT CATCAAAACC GAATACTTGG GCGCGTTGTG
CGGTCGCTGA GGCAAGGGGC ACCAGTGAGC GAGGACGCCG AATCGTCTAT CGTGCCCATG
GTCGAGGTTG TAGATGGTGC GGGCGCAGAT ACCTTGGAGC AGAACAGTAA AGGCCGGGCG
AGCCCTGTTG CCGGGCCTTT CTCGATAGGT GAAGCCTCCA GGAGGCGACC ACCACTTGTC
GAACATGATG ATTACCCCCT GGGCGCCGAT GCTACACCTT CGACCGAGCC AGGCCATGGC
TCTCGGCAAC GCGGTTCACA AACATTGGTC GCCGCAAAGG CGGCGGCTCG GGACGTGAGG
CTGGGTGCGC TACTGAAGGT AGGTTCCACC GCAGCTACTG CTTCGACTGC TCAAGAATGG
GGTGAAGGGC TGGGAGGTGC GACTGGAGGC TTTGCAGGAA GTGTGCTAGG TGCAGCCTTG
AGCAAGTACG CCGGCAGAAA TGCCGAATAT GGCAAGGTGG TGGGGGGCTT CTTTGGCGAA
AAAGTGGGGG CGGCGCTTGG TAAGCGTGTT GCTCCTCACT CCGAACCGGG GGTACTAGGA
GAGGTTGCTG CGCCTACCAC GACCGCCCCA TCGACGGAAG CTGAAACCTC GCAGAGTTCA
CTCGGGCAAG GCATGCTGAC TGGTGTGAGC ATTGGCTCCA TTGCGCGCGC TCATCAGTCC
GGTAAACAGT CTTCAGCGAT GAACTGGAAT AGGCTGAAGG GCTGGTTGGG CAAAGGCAGC
CCCGCAGCCA ATGATCCTTA TCCTCTCGGG GCAGATGCAG GCCCTTCTCC TACAGAGATC
GGTAAACGTG CGCCGCCTTG GAGGACGGTT GGCGAAGTCT TCAAGGAGGA AGGCAAGAGT
GTTTTGCTGG AAGCGGCCCT GAAGGCAGGA CACACCTACG CGACTGCCAA GACAGCAGAG
GAGGCTTGGG CCGGCTACGG CGGTGCTATT GGAGGACTGG GCGGTTCAGT TGCAGGGGCA
GTGGTGCTCA AAAGGATCTT GCCTTTTGTA AGCCCGTCAG TGGGTACCAC GCTTGGGGGG
GAGGTCGGTG ACAAGGCCGG TACCGCGCTT GGCGGTTGGC TCGCGCGGAA ACTGTCCAAG
GACGAGCCCC ATCCACCTGC AAGTACTCCC TTGCCAGCCG TTTCTCTTCT GGCTTCGCCC
AAGCCGCTCG TCACGCCAAT TCCGACCAAC GAGTTGTTTG GCCTTCAGCT AGGTACGGTA
ACTGTCAAAC GCCTGTTGTC GACGCCGGAA CTGGCGCGAC AAAAGTGGGT GGCTAAGCGC
TCTTTGCCGC AGGTGTCACT GCTGGACACG CCCAAGCATT CGCTCACCCC CCTGCCTCAG
ACGGCGTTTC TTGAAGACCA GGTCGGTACC CGGATCACCA GGCACCTGCT GGCACACCCC
GCTGCGGCTC AGCCCAGGGC AGTCCAGCCG CAGCGGCCGG CGCCAGTGTC GCTGCTCCGG
CCTGCCTCAC CCGAGGCGTT GAATGAAGCA GCAGGCGATC GTCTATTCCC CTTGCGCGTA
CCCCCGGCGG CACCCGCACT TCCAGACCCT GACGGTCCCT TGCCCCCTCA GGCCAAACAG
TCTCCGCCGA TCGCTCAACA TTACACCTTC AACGCCAACC TGCCGGTAAC GATCAACGGC
TGCCTCGACG ATCCGGCCGT CCTGCAACGG TTGGAGGCGA TGGTGCAACG CACGCTACAG
GAGCTGATCA GCCGCAAGGC GGCTACGCAG CTTTCTGATC CCATCTACGC GTGA
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| Protein sequence | MANNSAATDA SQQPLSDPEH DRINLAQVFS HQNRILGRVV RSLRQGAPVS EDAESSIVPM
VEVVDGAGAD TLEQNSKGRA SPVAGPFSIG EASRRRPPLV EHDDYPLGAD ATPSTEPGHG
SRQRGSQTLV AAKAAARDVR LGALLKVGST AATASTAQEW GEGLGGATGG FAGSVLGAAL
SKYAGRNAEY GKVVGGFFGE KVGAALGKRV APHSEPGVLG EVAAPTTTAP STEAETSQSS
LGQGMLTGVS IGSIARAHQS GKQSSAMNWN RLKGWLGKGS PAANDPYPLG ADAGPSPTEI
GKRAPPWRTV GEVFKEEGKS VLLEAALKAG HTYATAKTAE EAWAGYGGAI GGLGGSVAGA
VVLKRILPFV SPSVGTTLGG EVGDKAGTAL GGWLARKLSK DEPHPPASTP LPAVSLLASP
KPLVTPIPTN ELFGLQLGTV TVKRLLSTPE LARQKWVAKR SLPQVSLLDT PKHSLTPLPQ
TAFLEDQVGT RITRHLLAHP AAAQPRAVQP QRPAPVSLLR PASPEALNEA AGDRLFPLRV
PPAAPALPDP DGPLPPQAKQ SPPIAQHYTF NANLPVTING CLDDPAVLQR LEAMVQRTLQ
ELISRKAATQ LSDPIYA
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