Gene PputW619_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3931 
Symbol 
ID6112895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4364962 
End bp4365711 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID641623720 
Productphage minor tail protein L 
Protein accessionYP_001750780 
Protein GI170723092 
COG category[S] Function unknown 
COG ID[COG4672] Phage-related protein 
TIGRFAM ID[TIGR01600] lambda-like phage minor tail protein L 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGA TCACGCAGCT GCAGAAACTG GAGCCGGGCG CGGAGATCCT GCTGTTTGAA 
CTGGACGGTT CGGACTTCGG GGCGGACACG CTCCGGTTCC ACGGGCATGC AATCCCGCAT
TCGCCCGAGG AGCTGGCCGC AGCTGGCGCA AACGCCGACC AGCTTCCGGC CAAGTCGATC
TCGTGGCAGG GCAACGAGTA CGGTGCCTGG CCTATGCAGA TAGAGGGCAT TGAAGCGAAC
TCGGACGGTA CGGCAGTACG ACCCACGCTG ACCGTGGGCA ACGTCAACGG CAGGATTACG
GCGCTGTGCC TGGCCTTCGA CAACTTGCTC GAGTTCAAGC TGACCATGCG TCACACCATG
GCGCGCTACT TGGACGCGGC AAATTTCCCC GCCGGTAACC CGGAAGCTGA CCCGAGTGAG
GAGGCGATCG AGGTCTGGTA CATCGACCAG AAGGTGTCCG AGAACGGCAC CGCTGTGTCT
TGGGAGCTGG CCAGCCCTGG CGACGTGGGC GGGGAGACAA TCGGCCGGCA GATGACCCAG
CTTTGCCACT GGGCAATGAC CGCCGGGTAC CGTGGGCCGA ACTGCGGTTA TACCGGCCCT
TATTTCGACC TTGACGGCAA TCCAACGGAC GATCCGGCCA AGGATCAGTG CAATGGGTGC
TTCGATACCG GGTGCACTGT CCGTCATGGT CCGGGTAACC AGCTGCCCTT CGGCGGCTTC
CCGGCCGTTT CCCTGATCGC ACGGAGCTGA
 
Protein sequence
MSLITQLQKL EPGAEILLFE LDGSDFGADT LRFHGHAIPH SPEELAAAGA NADQLPAKSI 
SWQGNEYGAW PMQIEGIEAN SDGTAVRPTL TVGNVNGRIT ALCLAFDNLL EFKLTMRHTM
ARYLDAANFP AGNPEADPSE EAIEVWYIDQ KVSENGTAVS WELASPGDVG GETIGRQMTQ
LCHWAMTAGY RGPNCGYTGP YFDLDGNPTD DPAKDQCNGC FDTGCTVRHG PGNQLPFGGF
PAVSLIARS