| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3774 |
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| Symbol | |
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| ID | 6112738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4195655 |
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| End bp | 4196344 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623565 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001750625 |
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| Protein GI | 170722937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4215] ABC-type arginine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.134573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00153221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGAAAG GCTACGGGGC AGTCATCCTC GACGGGGCGT GGCTGACGCT GCAGCTCGCC
CTGTCGTCGA TGGCCCTGGC CATTGTGCTC GGCCTGATTG GCGTGGCGCT GCGCTTGTCG
CCGGTGCGCT GGCTGGCCTG GTTGGGCGAT ATGTATTCCA CGGTGATCCG GGGTATTCCG
GACCTGGTGC TGATCCTGCT GATCTTCTAC GGCGGGCAGG ACATCATCAA CCGTTTGGGG
CCGCTGGTGG GCTATGACGA CTACATCGAC CTGAACCCGC TGGTCGCAGG CATCGGTACC
CTGGGCTTCA TCTTTGGCGC CTACCTGTCA GAAACCTTCC GCGGTGCGTT CCTGGGTATT
CCCAAGGGCC AAGCCGAAGC TGGCGCGGCC TATGGCATGA GCAACCGGCA GGTATTCTTC
CGTATTCAGG TACCGCAGAT GATCCGCCTG GCGATCCCGG GCTTCACCAA CAACTGGTTG
GTACTGACCA AGGCGACGGC CCTGATTTCG GTGGTCGGCC TGCAGGACAT GATGTTCAAG
GCCAAGCAGG CGGCAGACGC CACCCGCGAA CCCTTCACCT TCTTCCTGGC GGTGGCGGCG
TTGTACCTGG TGCTGACCAG TGTCTCGCTG CTGGCACTGA AGTATCTCGA GAAGCGCTAC
TCGGTGGGCG TCAAGGTGGC TGAGCTATGA
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| Protein sequence | MLKGYGAVIL DGAWLTLQLA LSSMALAIVL GLIGVALRLS PVRWLAWLGD MYSTVIRGIP
DLVLILLIFY GGQDIINRLG PLVGYDDYID LNPLVAGIGT LGFIFGAYLS ETFRGAFLGI
PKGQAEAGAA YGMSNRQVFF RIQVPQMIRL AIPGFTNNWL VLTKATALIS VVGLQDMMFK
AKQAADATRE PFTFFLAVAA LYLVLTSVSL LALKYLEKRY SVGVKVAEL
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