| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3563 |
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| Symbol | |
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| ID | 6112521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3968173 |
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| End bp | 3968703 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641623349 |
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| Product | extracytoplasmic-function sigma-70 factor |
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| Protein accession | YP_001750414 |
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| Protein GI | 170722726 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.661708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAC AACTATCCAC AAGTAAGTGC GATTCACCAT TACTCCAGGC ATTCGTCGAC
AACCGCAGTA TCCTGGTCAA GATCGCAGCC CGCATTACCG GCTGCCGCTC ACGGGCCGAA
GACGTGGTGC AGGACGCTTT CTTCCGGCTC GGCGCCGCCC CCCAGATCAC CTCGTCGTTC
AAGGCCCAGC TCAGCTACCT GTTCCAGATC GTGCGCAACC TGGCCATCGA CCATTACCGC
AAACAGGCGA TGGAGCTGAA GTATTCAGGC AGCGAAGAGG AAGGCTTGAA CGTGGTCATC
CAGAATGCCT CGCCCGAAGC CACGCACATC AACCTGGCGG CCCTCGAGCA CATTGCCGAG
GCGCTCAACG AGCTACCCCA GCGCACCCGT TACGCTTTCG AGATGTACCG CCTGCACGGC
GTGCCGCAGA AAGACATCGC CAAGGAGCTG GGTGTGTCGC CCACGCTGGT CAACTTCATG
ATCCGTGATG CGCTGGTACA TTGCCGCAAG ACCGCCAGCC GGCAGGTCTG A
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| Protein sequence | MAEQLSTSKC DSPLLQAFVD NRSILVKIAA RITGCRSRAE DVVQDAFFRL GAAPQITSSF
KAQLSYLFQI VRNLAIDHYR KQAMELKYSG SEEEGLNVVI QNASPEATHI NLAALEHIAE
ALNELPQRTR YAFEMYRLHG VPQKDIAKEL GVSPTLVNFM IRDALVHCRK TASRQV
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