| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3474 |
|---|
| Symbol | |
|---|
| ID | 6112432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3825541 |
|---|
| End bp | 3826560 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641623261 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001750326 |
|---|
| Protein GI | 170722638 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTGT CCCCTCTCAA CCGTCGGCGC TTCGAGCGCT TCAAGGCCAA CCGACGCGGC
TGGTGGTCGC TGTGGCTGTT CCTCATCCTG TTCGGCCTGA GCCTGGGCGC CGAGCTGATC
GCCAACGACA AACCGATTGC CGTGCGCTAC GACGGCGAGT GGTTTTTCCC GGCCTTCAAG
CGCTACCCGG AAACCACCTT CGGCGGCGAG TTCCCGCTGG AGGCCAACTA CAAGAGCCCG
TATATCCGGG AGCTACTGGC CAAAAAAGAC AGCTTCGTGC TGTGGGCCCC GATCCCGTAC
AGCTACCAGA GCATCAATTA CGACCTGCGC GTACCCGCCC CAGCGCCACC CTCGCCGGAC
AACCTGCTGG GCACCGACGA TCAGGGCCGC GATGTGCTGG CGCGGGTGAT CTACGGCTTC
CGCATTTCGG TGCTGTTCGC CCTCACCCTG ACCATCCTCA GTTCCATCAT CGGCGTCATC
GCCGGTGCCC TGCAGGGCTT TTACGGTGGC TGGGTGGACC TTGCCGGCCA GCGCTTTCTG
GAGATCTGGT CCGGCTTGCC GGTGCTGTAC CTGCTGATCA TCCTCGCAAG CTTCGTGCAA
CCCAACTTCT GGTGGTTGCT GGGCATCATG CTGCTGTTTT CGTGGATGAG CCTGGTTGAC
GTGGTGCGCG CCGAGTTCCT GCGCGGGCGC AACCTCGAGT ACGTGCGCGC CGCCCGTGCC
CTAGGGATGC GCAACGGCGC GATCATGTAC CGGCACATCC TGCCCAACGC CATGATTTCG
ACCATGACCT TCATGCCCTT CATCCTCACA GGCGCCATCG GCACCCTGAC CGCCCTGGAC
TTCCTCGGTT TCGGCCTGCC ACCGGGCGCG CCGTCGCTGG GCGAACTGGT GGCCCAAGGC
AAGTCCAACC TGCAGGCGCC ATGGCTGGGC ATCAGCGCCT TTGCCGTGCT GGCGATCATG
CTGAGCCTGC TGGTATTCAT CGGCGAATCC GCCCGCGATG CCTTCGACCC GAGGAAGTGA
|
|---|
| Protein sequence | MALSPLNRRR FERFKANRRG WWSLWLFLIL FGLSLGAELI ANDKPIAVRY DGEWFFPAFK
RYPETTFGGE FPLEANYKSP YIRELLAKKD SFVLWAPIPY SYQSINYDLR VPAPAPPSPD
NLLGTDDQGR DVLARVIYGF RISVLFALTL TILSSIIGVI AGALQGFYGG WVDLAGQRFL
EIWSGLPVLY LLIILASFVQ PNFWWLLGIM LLFSWMSLVD VVRAEFLRGR NLEYVRAARA
LGMRNGAIMY RHILPNAMIS TMTFMPFILT GAIGTLTALD FLGFGLPPGA PSLGELVAQG
KSNLQAPWLG ISAFAVLAIM LSLLVFIGES ARDAFDPRK
|
|---|
| |