| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3412 |
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| Symbol | |
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| ID | 6112365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3754320 |
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| End bp | 3756590 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623195 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001750265 |
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| Protein GI | 170722577 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.117396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACC GCGAGCTCGA AGTCACCCTC AATCTTGCCT TCAAGGAGGC TCGTTCGAAG
CGTCATGAGT TCATGACCGT CGAGCATCTG CTGCTGGCAC TCCTTGACAA TGAGGCTGCT
GCGACCGTTC TGCGCGCCTG TGGCGCCAAT CTCGACAAAC TCAAGCACGA CCTGCAAGAG
TTCATCGATT CCACCACTCC CCTGATTCCC GTCAACGACG AGGATCGCGA AACCCAGCCG
ACCCTGGGCT TCCAGCGTGT GCTGCAGCGT GCCGTGTTCC ACGTGCAAAG CTCCGGCAAG
CGCGAAGTCA CCGGTGCCAA TGTGCTGGTG GCGATCTTCA GCGAACAGGA AAGCCAGGCC
GTGTTCCTGC TCAAGCAGCA GAGCGTGGCC CGTATCGACG TGGTCAACTA CATTGCCCAC
GGCATTTCCA AGGTGCCGGG CCACGGCTCA CAGAGCGACA GCGACCAGGA AATGCAGGAC
GAGGAGGGCG GCGAGACGTC GTCCTCGAGC AACCCGCTGG ATGCTTACGC CAGCAACCTG
AATGAACTGG CCCGCGCTGG GCGGATCGAC CCGCTGGTAG GTCGCGAGCA GGAAGTCGAG
CGCGTGGCGC AGATCCTTGC CCGTCGACGC AAGAACAACC CGCTGCTGGT CGGTGAGGCA
GGGGTGGGCA AGACTGCCAT CGCCGAAGGC CTGGCCAAGC GCATCGTCGA TGGTCAGGTG
CCCGACCTGC TGTCGCAGAG CGTGGTGTAT TCGCTCGACC TTGGCGCACT GCTGGCGGGT
ACCAAGTACC GCGGCGACTT CGAGAAGCGC TTCAAGGCGT TGCTCGGTGA GTTGCGCAAA
CGCCCACAGG CCATCCTGTT CATTGACGAA ATCCACACCA TCATTGGTGC CGGTGCTGCG
TCGGGCGGCG TGATGGACGC GTCCAACCTG CTCAAGCCGC TGCTGTCTTC CGGCGAGATC
CGCTGCATTG GTTCGACGAC CTTCCAAGAG TTTCGCGGCA TCTTCGAGAA GGACCGTGCC
TTGGCACGGC GCTTCCAGAA GGTGGATGTC AGCGAGCCGT CCGTCGAGGA CACTGTGGGC
ATTCTGCGCG GCCTCAAAGG GCGCTTTGAA AGCCATCACA ACATCGAGTA CAGCGACGAA
GCCCTGCGCG CCGCCGCTGA GCTGGCATCA CGCTACATCA ACGACCGCCA CATGCCGGAC
AAGGCGATCG ACGTGATCGA CGAGGCTGGT GCTTATCAGC GCCTGCAGCC TGAGGCGAAT
CGGGTCAAGC GTATCGATGT GCCGCAAGTC GAGGACATCG TGGCCAAGAT CGCGCGGATT
CCGCCGAAGC ACGTCACCAG CTCCGACAAG GAGCTGCTGC GTAACCTGGA GCGTGACCTG
AAACTGACCG TATTCGGTCA GGATCAGGCG ATCGATTCGC TGGCCACCGC AATCAAGCTG
TCCCGTGCAG GCCTCAAGGC ACCCGACAAG CCGGTCGGTT CGTTCTTGTT CGCCGGCCCT
ACCGGGGTGG GCAAGACCGA AGCGGCGCGC CAGTTGGCCA AGGCGCTGGG CGTTGAGCTG
GTGCGCTTCG ACATGTCCGA GTACATGGAG CGGCACACTG TGTCGCGCCT GATCGGTGCT
CCTCCAGGGT ATGTCGGGTT CGACCAGGGT GGTCTGCTGA CCGAGGCGAT CACCAAGCAG
CCGCATTGCG TATTGCTGCT CGATGAGATC GAGAAGGCTC ACCCGGAAGT CTTCAACCTG
CTGCTGCAGG TGATGGACCA CGGTACCCTT ACCGACAACA ACGGGCGCAA AGCGGACTTC
CGCAACGTGA TCCTGATCAT GACCACCAAT GCCGGTGCTG AAACTGCGGC ACGCGCTTCC
ATCGGGTTCA CCCATCAGGA CCATGCGTCC GATGCGATGG AGGTCATTCG CAAGAGCTTC
ACGCCAGAGT TCCGCAACCG TCTGGACACC ATCATCCAGT TCGGCCGCCT GAGTCACGAG
ACGATCAAGA GCATCGTCGA CAAGTTCCTC ATCGAACTTC AGGCGCAGCT GGAAGACAAG
CGTGTGCTGC TTGAAGTCAG CGATGCCGCC CGCGGCTGGC TGGCGGCCTC TGGCTACGAC
GTGCAGATGG GGGCGCGGCC AATGGCGCGG CTTATCCAGG ACAAGATCAA GCGGCCGCTG
GCCGAGGAGA TCCTGTTTGG CGAGTTGGCC GAGCATGGCG GTGTGGTGCA CATCGACCTG
CGCGATGGCG AGTTGGTGTT CGACTTCGAG ACCACGGCAG AAGTGGCGTG A
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| Protein sequence | MLNRELEVTL NLAFKEARSK RHEFMTVEHL LLALLDNEAA ATVLRACGAN LDKLKHDLQE
FIDSTTPLIP VNDEDRETQP TLGFQRVLQR AVFHVQSSGK REVTGANVLV AIFSEQESQA
VFLLKQQSVA RIDVVNYIAH GISKVPGHGS QSDSDQEMQD EEGGETSSSS NPLDAYASNL
NELARAGRID PLVGREQEVE RVAQILARRR KNNPLLVGEA GVGKTAIAEG LAKRIVDGQV
PDLLSQSVVY SLDLGALLAG TKYRGDFEKR FKALLGELRK RPQAILFIDE IHTIIGAGAA
SGGVMDASNL LKPLLSSGEI RCIGSTTFQE FRGIFEKDRA LARRFQKVDV SEPSVEDTVG
ILRGLKGRFE SHHNIEYSDE ALRAAAELAS RYINDRHMPD KAIDVIDEAG AYQRLQPEAN
RVKRIDVPQV EDIVAKIARI PPKHVTSSDK ELLRNLERDL KLTVFGQDQA IDSLATAIKL
SRAGLKAPDK PVGSFLFAGP TGVGKTEAAR QLAKALGVEL VRFDMSEYME RHTVSRLIGA
PPGYVGFDQG GLLTEAITKQ PHCVLLLDEI EKAHPEVFNL LLQVMDHGTL TDNNGRKADF
RNVILIMTTN AGAETAARAS IGFTHQDHAS DAMEVIRKSF TPEFRNRLDT IIQFGRLSHE
TIKSIVDKFL IELQAQLEDK RVLLEVSDAA RGWLAASGYD VQMGARPMAR LIQDKIKRPL
AEEILFGELA EHGGVVHIDL RDGELVFDFE TTAEVA
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