| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3403 |
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| Symbol | |
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| ID | 6112356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3744684 |
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| End bp | 3746078 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641623186 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001750256 |
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| Protein GI | 170722568 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.242571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACC TGCCGCTGTT CCACAAGCTG CAGGGCGGCC GCGTGCTGGT CGTCGGCGGC
GGCGAGATCG CCTTGCGCAA GGCGCGCCTG CTGGCCGATG CTGGCGCCGC GCTGCGGGTG
GTGGCGCCCG AGGTCGACGG CCAACTGGCT GCGCTGGCCC GTGAAGGTGG CGGTGAGGTC
CTGGTGCGTG GCTATCAGGC GGCCGACCTG GTCGGCTGCC GCCTGGTGAT CGCAGCCACC
GACGACCCTG GGCTCAATGC CCAGGTGTCG GCGGATGCGC AGGCGCTTTG CGTGCCGGTC
AACGTGGTGG ATGCACCGGC CCTGTGTACG GTGATCTTCC CGGCCATTGT CGACCGCTCG
CCCCTGGTGG TTGCGGTATC CAGCGGCGGT GACGCCCCGG TGCTGGCGCG CCTGATTCGC
GCCAAGCTGG AAACCTGGAT CCCGTCCACC TACGGCGAAC TGGCCGCCTT GGCGGCGCGC
TTCCGGCACA AGGTCAAGTC GCTGTACCCG GATGTCAATC AGCGTCGCGG CTTCTGGGAA
ACGGTGTTCC AAGGGCCGAT CGCCGAGCGT CAGCTGGCCG GGCAGGGTGC CGAGGCCGAG
CGGCTGTTGC AGGCCATGGT CGACGGTGCG CCGGTGCAGC AGGGTGGTGA GGTGTATCTG
GTGGGGGCGG GGCCGGGTGA TCCTGACTTG CTCACCTTCC GCGCCTTGCG CCTGATGCAG
CAGGCCGATG TGGTGTTGTA TGACCGCCTG GTCGCACCGG CAATCATTGA AATGTGCCGC
CGCGATGCCG AACGTATTTA CGTCGGTAAA CGCCGCGCCG AGCATGCCGT GCCGCAGGAC
CAGATCAACC GTCTGCTGGT CGACCTGGCC CGCGAGGGTA AGCGCGTGTT GCGCCTGAAG
GGAGGCGACC CGTTCATTTT CGGTCGTGGT GGCGAAGAGA TCGAAGAACT CGCCGAGCAT
GGCATCCCGT TCCAGGTGGT GCCCGGTATT ACCGCGGCCA GTGGTTGCTC TGCCTACGGC
GGCATTCCGC TGACCCACCG CGATTATGCC CAGTCGGTGC GTTTCGTCAC CGGCCACCTC
AAGGACGGTA CCAGCAACCT GCCTTGGAAT GACCTGGTGG CGCCGAACCA GACCTTGGTG
TTCTACATGG GCCTGGTAGG GTTGCCGACC ATTTGCGCCG AGCTGATTCG CCATGGGCGT
GCATCGAGCA CGCCAGCGGC GTTGGTGCAA CAGGGGACTA CGCGCAATCA GCGGGTGTTC
ACTGGCACCT TGGCCGACCT GCCAGCATTG GTGGCCCAGC ATGAAGTGCA TGCGCCGACC
CTGGTGATTG TCGGGGAAGT GGTGCAGTTG CGCGAAAAGC TGGCTTGGTT TGAAGGTTCG
CAGCAAGACC AGTAA
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| Protein sequence | MDYLPLFHKL QGGRVLVVGG GEIALRKARL LADAGAALRV VAPEVDGQLA ALAREGGGEV
LVRGYQAADL VGCRLVIAAT DDPGLNAQVS ADAQALCVPV NVVDAPALCT VIFPAIVDRS
PLVVAVSSGG DAPVLARLIR AKLETWIPST YGELAALAAR FRHKVKSLYP DVNQRRGFWE
TVFQGPIAER QLAGQGAEAE RLLQAMVDGA PVQQGGEVYL VGAGPGDPDL LTFRALRLMQ
QADVVLYDRL VAPAIIEMCR RDAERIYVGK RRAEHAVPQD QINRLLVDLA REGKRVLRLK
GGDPFIFGRG GEEIEELAEH GIPFQVVPGI TAASGCSAYG GIPLTHRDYA QSVRFVTGHL
KDGTSNLPWN DLVAPNQTLV FYMGLVGLPT ICAELIRHGR ASSTPAALVQ QGTTRNQRVF
TGTLADLPAL VAQHEVHAPT LVIVGEVVQL REKLAWFEGS QQDQ
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