| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3274 |
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| Symbol | |
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| ID | 6112225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3614000 |
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| End bp | 3615127 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641623056 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001750128 |
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| Protein GI | 170722440 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTATC GCGCCGATCT TTCACGCCGC ACCTTTATCA AGAGCAGCAG CATTCTGGCC
GGTGTCGCGG CGCTTTCCGG GGTACTGCCG AGCAGAACCT TTGCCGCGGC CGAAAAAGAA
CTGGTGATAC TGGCGTGGGC AGGCCACGCC GCGCCCGACA TCGTCGCGGA TTTCGAGCGC
GAGCATGGGG TCAAGGTGCG GGCCAAGTAC TACACCGGCG GCGATAACAT GCTGGGGCTC
ATTTCGCAGT CACCACCGGG CACCTTCGAC CTGATCCTGT CGGATGCCGA GTATGTGCAA
CAACTCAACG CCGCCGACTA TATCGAGCGA CTGGACCCTG CCGATTATCC TTTCGATGAC
TTCTACCCAG AGTTTCAGCA CTTTCCAGGG CACTGGCAGG GCGATGAATT GTACTCGGTC
ATGGTCCGCT TCGGCTTTCT CGGCATCGCC TTCAATACCC AGCTGCTGCC GGAGTCCAAG
GCGAAAAGCT ACCAAGTGTT CTGGGACGAC AGCCTCAAGG GCAAGGTCGG TCACTTCGAC
TGGCACCTGC CGAACCTGGG GCAGATCAGC TTGCTCAATG GCAACAGGCT GCCCTACGAC
ATCGACGCGG CGCACTGGAA GAGGCTCCAG GAGAAAACCA TGAGCCTACG CGGGCAGGTG
GCCGGGTTCT TCGATTATGG CAGTACCTTC TCCTCCCTGA AAAACGGCCA GATCCACGCG
ATGTGTGGCA TTGGTGACTG GATTACCGGG GTCTTGCAGC GTGCCGGGGC ACCGGTAAAA
ACAGTGATAC CCGAGGAGGG CGGCCTGCAA TGGACCGAGT CGTATTGCAT CGCCAAGAAA
GCCCGCAGCC CGGAACTTGC GAAGAAGTTC ATTCAATACA TCACCTCTCC TGAAGGCCAG
GTGAAGTCGG CGAAGATGGA GGCTTACCCG GCGCTGATTC CCAACAAGCG CGGCTGGGAG
TTGCTAAACA CTACCGACCT TGCCGAAGCC AAACGCCAAG GCATGGTACT GGGCCAGCGC
AATGTCATGG ATGACATCCG CGAGGGGCGT ATTCAGTATC GCGCGCTCCC CGTGCAGCAG
AGCCTGGAGG ACTGGAACGA CTTCTGGTCG CAATACAAGG GCGCTTGA
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| Protein sequence | MTYRADLSRR TFIKSSSILA GVAALSGVLP SRTFAAAEKE LVILAWAGHA APDIVADFER
EHGVKVRAKY YTGGDNMLGL ISQSPPGTFD LILSDAEYVQ QLNAADYIER LDPADYPFDD
FYPEFQHFPG HWQGDELYSV MVRFGFLGIA FNTQLLPESK AKSYQVFWDD SLKGKVGHFD
WHLPNLGQIS LLNGNRLPYD IDAAHWKRLQ EKTMSLRGQV AGFFDYGSTF SSLKNGQIHA
MCGIGDWITG VLQRAGAPVK TVIPEEGGLQ WTESYCIAKK ARSPELAKKF IQYITSPEGQ
VKSAKMEAYP ALIPNKRGWE LLNTTDLAEA KRQGMVLGQR NVMDDIREGR IQYRALPVQQ
SLEDWNDFWS QYKGA
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