Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3116 |
Symbol | |
ID | 6112066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3451040 |
End bp | 3452827 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641622901 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001749975 |
Protein GI | 170722287 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.583014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA CCCCGAAACG CCCGCTGCGC AGTCAGCAAT GGTTCGACGA CCCGAGCCAC GCCGACATGA CCGCGCTGTA CGTCGAGCGC TACATGAACT ACGGCCTGAC CCGCGATGAA CTGCAATCGG GGCGGCCGAT CATTGGCATC GCACAGACCG GAAGTGACCT GACGCCCTGC AACCGCCACC ACCTGGAACT GGCCCAGCGG GTCAAGGCCG GCATCCGTGA TGCTGGAGGC ATTCCGATGG AATTCCCGGT GCACCCTATA GCCGAACAGA GCCGTCGGCC CACCGCCGCG CTCGACCGCA ACCTGGCATA CCTGGGGTTG GTGGAAATCC TTCATGGCTA CCCGCTGGAT GGCGTGGTGT TGACCACCGG CTGCGACAAG ACTACGCCAG CCTGCTTGAT GGCCGCCGCC ACCACCGACC TGCCGGCCAT TGTGCTGTCC GGCGGGCCAA TGCTCGACGG CCATCACAAG GGCCAGCTGA TCGGTTCGGG CACGGTGCTG TGGCACGCAC GCAATCTGAT GGCTGCCGGC GAAATCGACT ACGAAGGCTT CATGGAAATG ACTACCGCCG CTTCGCCGTC GGTTGGCCAC TGCAACACAA TGGGCACGGC GCTGTCGATG AACGCTCTGG CCGAAGCCCT TGGCATGTCG CTGCCCGGTT GCGCCAGTAT CCCCGCGCCC TATCGGGAGC GCGGGCAGAT GGCCTACGCC ACCGGCAGGC GCATCTGCGA GTTGGTGATG CAAGACGTAC GCCCCTCATC AATCATGACC CGAGAAGCAT TCGAGAACGC CATCGCTGTA GCCTCGGCGC TAGGCGCCTC AAGCAATTGC CCACCACACT TGATCGCCAT CGCTCGACAC ATGGGCATCG AGCTGTCGCT CGACGACTGG CAGCGCATTG GCGAAGACGT GCCGCTGCTG GTCAACTGCA TGCCGGCGGG CAAGTACCTG GGCGAAGGTT TCCACCGTGC CGGTGGCGTA CCGGCGGTGA TGCACGAATT GCGCAAGGCA GGCCGCCTGC ACGAAGCCTG CGCCACGGTC AGCGGCAAGA CCATCGGCGA GGTGGTCAGC GACACGGTCA CCAGCAACCG CGACGTGATT CTGCCGTTCG ACGAGCCGCT CAAGCACAGC GCTGGGTTCA TCGTTCTCAG TGGCAATTTC TTCGACAGCG CGATCATGAA GATATCGGTA GTCGGCGAAG CCTTCCGCAA GACCTATCTG TCAGAGCCCG GCAAGGAAAA CAGCTTCGAG GCGCGGGCCA TCGTGTTCGA GGGCCCCGAG GACTACCACG CGCGCATCGA TGACCCAGCA CTGGACATCG ACGAGCGTTG CATCCTGGTG ATCCGTGGCG CCGGCACCGT GGGTTACCCG GGTAGTGCAG AGGTGGTCAA CATGGCGCCA CCGGCGGCGC TGATCAGAAA GGGCATCGAC TCGCTGCCGT GCCTGGGCGA CGGTCGCCAG AGCGGCACCT CGGCCAGCCC GTCGATTCTC AACATGTCGC CGGAAGCGGC GGTCGGGGGC GGCCTGGCAC TGCTTCAGAC CAACGACTTG CTGCGCGTCG ACCTCAACCA ACGTCGCGTC GACCTGCTGG TAGACGACAA GGAAGTGGAG CGCCGTCGCG CAGCCTGGAA GCCGAACATC CCAATCTCTC AGACACCATG GCAAGAGCTC TACCGCCAAT TGGTCGGGCA ATTGTCCACC GGTGGCTGCC TGGAACCGGC CACCCTGTAC ATGCGTGTGA TTGCCCGCGA AGGAGGGATG CCACGACATT CCCATTGA
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Protein sequence | MTDTPKRPLR SQQWFDDPSH ADMTALYVER YMNYGLTRDE LQSGRPIIGI AQTGSDLTPC NRHHLELAQR VKAGIRDAGG IPMEFPVHPI AEQSRRPTAA LDRNLAYLGL VEILHGYPLD GVVLTTGCDK TTPACLMAAA TTDLPAIVLS GGPMLDGHHK GQLIGSGTVL WHARNLMAAG EIDYEGFMEM TTAASPSVGH CNTMGTALSM NALAEALGMS LPGCASIPAP YRERGQMAYA TGRRICELVM QDVRPSSIMT REAFENAIAV ASALGASSNC PPHLIAIARH MGIELSLDDW QRIGEDVPLL VNCMPAGKYL GEGFHRAGGV PAVMHELRKA GRLHEACATV SGKTIGEVVS DTVTSNRDVI LPFDEPLKHS AGFIVLSGNF FDSAIMKISV VGEAFRKTYL SEPGKENSFE ARAIVFEGPE DYHARIDDPA LDIDERCILV IRGAGTVGYP GSAEVVNMAP PAALIRKGID SLPCLGDGRQ SGTSASPSIL NMSPEAAVGG GLALLQTNDL LRVDLNQRRV DLLVDDKEVE RRRAAWKPNI PISQTPWQEL YRQLVGQLST GGCLEPATLY MRVIAREGGM PRHSH
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