| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3075 |
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| Symbol | |
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| ID | 6112025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3415302 |
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| End bp | 3415847 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641622860 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001749934 |
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| Protein GI | 170722246 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCAGG ACTCGCGCCT CAGTGGCGCC CCCTTCAAAC GGCTGTTTTT CGCCCTGCCG
GTAACCGACG CCCAGCAGCG TGCGATAGCC CAGTGGCGGC GTGGCCTCCA GCTGCGTAGT
GGCAAACCGG TGCCCAGTGC GAACTTCCAC CTGACCCTGA TGTTTCTAGG CGATGTGGAT
GCAGCGCAGG TACCGGCGAT TTGCGCTGCG GTAGACAACC TGGCGCGCCC TGACGCCCCC
CTGCGCCTGC TGCTCGATCA GCTCAAGGTC TGGCCGCGGG CAAACGTGCT GGTGCTCGAG
CCGCAGCAGG CACCGGCTGC ACTGCGCCAA CTTGCTTATG GGCTGCAGCA GGCACTGCTG
CCCATGGGCG TTGCCGAGCA GGCCCGTGAG TACCGGCCGC ACCTGACCCT GTCACGGGAC
TTTCGCGGCC AGGCGCCCGA GGCCAGCGTG GCGCCCGACT TCTTTATCGC CGCCCGGTAC
TTCGCGCTTT ACGAGTCGCG CAAAGGCCAG TACCTGCCGC TGGCGCAGTG GCCGTTGACG
CCGTGA
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| Protein sequence | MVQDSRLSGA PFKRLFFALP VTDAQQRAIA QWRRGLQLRS GKPVPSANFH LTLMFLGDVD
AAQVPAICAA VDNLARPDAP LRLLLDQLKV WPRANVLVLE PQQAPAALRQ LAYGLQQALL
PMGVAEQARE YRPHLTLSRD FRGQAPEASV APDFFIAARY FALYESRKGQ YLPLAQWPLT
P
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