Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2848 |
Symbol | |
ID | 6111799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3151802 |
End bp | 3152503 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641622635 |
Product | putative lipoprotein |
Protein accession | YP_001749709 |
Protein GI | 170722021 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.548247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.417935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGTCT CATTCCAGCC CCGCTGGCTG CTCGCCCTCG CCCTGCCCCT TGTGCTCGCC GCCTGTGGCG ACAGCGAACC CAAGCAACGT GCCGCCTTCA GCGAATTCCT GCAGACCCGT ATCGTCGACA AGCCAGGCGT TCATGTACCC AAGCTGAGCG CAGACGAAAC CAAGGCTTTT GGCCCCTACA GCGATCACTA TGCAGTCATC ACCCAGTTCA ACGGCGCGAT GGATGCCGCA GTGCAGCCTC TGGGTAACCT GCTACAAAAA GGCGCGGTTC GCTCGCTCAA TGATGTCACT GCCCGCCGTG ACGACATAAA GGCAGTGCAG ACCGGCCTGA ACGACATGGG CACCCAATTG CAGGAGCAAA AGGCCAAGGC GGACACCGCC CATGCCCAGC TCAAGCAGCC GGAAGACCTC AAAGTGGTTT ACGACAAGGC CTTTGAGCGC ACCGTCAGCG TCCCGGCCGA CACCTTCCTG GACGTGCTGC CGCAAATCAA CGGCACCCTG GACAGCAGCC TGAAGGTGGC CGACTACGTG GATGCGCACA AGGAAAAGAT AGAAATCAAC GGGGCCATCG TGAAGGTGTC CGACCCGACC GTTCAGGCTG AGTTGAATGC CTTGCTGGCG GACCTGAACA ACCAGGCCAA GACCGTGCAG CAGGCGCAGG CAAGGCTGAA GACGGTGATG CTCGGGCGTT AG
|
Protein sequence | MNVSFQPRWL LALALPLVLA ACGDSEPKQR AAFSEFLQTR IVDKPGVHVP KLSADETKAF GPYSDHYAVI TQFNGAMDAA VQPLGNLLQK GAVRSLNDVT ARRDDIKAVQ TGLNDMGTQL QEQKAKADTA HAQLKQPEDL KVVYDKAFER TVSVPADTFL DVLPQINGTL DSSLKVADYV DAHKEKIEIN GAIVKVSDPT VQAELNALLA DLNNQAKTVQ QAQARLKTVM LGR
|
| |