| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2812 |
|---|
| Symbol | |
|---|
| ID | 6111763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3113846 |
|---|
| End bp | 3114628 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641622599 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001749673 |
|---|
| Protein GI | 170721985 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.844738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CTTTGAGCGT TGCCAGCCTT GCCCCTGAGA ACGACCCACG CCCGGTGCTG
ATCCGCATCG AGGGCCTGAA CAAGCACTAT GGCGCTTTCC ATGTGCTGCG CGATATCGAC
CTGCAGGTGC ACGAAGGTGA ACGCATCGTG CTGTGCGGCC CCTCCGGCTC CGGCAAGTCC
ACCTTGATCC GTTGCATCAA CCGCCTTGAA ATTGCCGAAC AAGGCAGCGT CCGGGTAGCC
GGAACCGATC TGGCCGGCAA CACGCGCCAG GCCGCCCAGG TACGCAGCGA CATCGGCATG
GTGTTCCAGC ACTTCAACCT GTTCCCGCAC ATGAGCGTGC TCGACAACTG CCTGCTGGCT
CCCACCAGCG TGCGCGGCCT GTCCCGCAAG GACGCCGAGG AGCGTGCGCG GATGTACCTG
AGCAAGGTCG GCATCGAAAG CCAGGCGCTC AAATACCCCA GCCAGCTCTC CGGCGGCCAG
CAGCAGCGGG TGGCGATCGC CCGCGCCTTG TGCATGAAGC CGCGGATCAT GCTGTTCGAC
GAGCCGACCT CGGCGCTGGA CCCAGAAATG GTCGCTGAAG TGCTGGATGT TTTGGTACAA
CTGGCGGGCA CCGGTATGAC CATGCTCTGT GTTACCCATG AAATGGGCTT TGCCAGGCAG
GTTGCCGAGC GTGTGCTGTT CCTTGAAGGC GGGCAGATCA TCGAAGACAG CCCGCCGCAG
GTGTTCTTCA ACCAGCCGCG CACTGCACGT GCCAAAAGTT TTCTGGCGCA GATCCTTCAT
TGA
|
|---|
| Protein sequence | MTAPLSVASL APENDPRPVL IRIEGLNKHY GAFHVLRDID LQVHEGERIV LCGPSGSGKS
TLIRCINRLE IAEQGSVRVA GTDLAGNTRQ AAQVRSDIGM VFQHFNLFPH MSVLDNCLLA
PTSVRGLSRK DAEERARMYL SKVGIESQAL KYPSQLSGGQ QQRVAIARAL CMKPRIMLFD
EPTSALDPEM VAEVLDVLVQ LAGTGMTMLC VTHEMGFARQ VAERVLFLEG GQIIEDSPPQ
VFFNQPRTAR AKSFLAQILH
|
|---|
| |