Gene PputW619_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2471 
Symbol 
ID6111424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2748166 
End bp2748693 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content65% 
IMG OID641622266 
Producthypothetical protein 
Protein accessionYP_001749340 
Protein GI170721652 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.623057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.331692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA CTTCGCACAA TGGTAAGGCC TGCAACGGCT TCACCTACCT GGGTGTATTG 
CTGCTGATCG CAGCCAGCAG CGTGGCCCTG GCGTCCAGCG GCACGCTGTG GTCCAGCGCG
GCGCAGCGCG AAAAGGAGCG TCAGTTGCTG TGGGTGGGTG GCCAGTATGC CCAGGCACTG
CGCAGCTATT ACCGCGCTTC GCCAGGCCTG GCGCAGTACC CGCAGGCGCT GGCCGACCTG
CTGGAGGACA ACCGCTTTCC AGAGCCGAAA CGGCACATCC GCCGGTTGTA CCCGGACCCG
GTCACCGGCA GTGATGAATG GGGGCTGTTG CGTTCGATCG ACGGGCGCAT CACCGGGGTG
CACAGCCGCT CCGACGCCAC CCCGTTCAAA CGCAGTGGTT TCGACACTCA GTGGTCCGGC
TTCGAAGGCC TCGAGCACTA CAGCGATTGG CAGTTCGTCG CCGAGCAGGC CTTCAGCGAA
AGCGCCAGTG GCGCACAGAC CCACAGTAGC CCGGGGGATG CGCCATGA
 
Protein sequence
MAATSHNGKA CNGFTYLGVL LLIAASSVAL ASSGTLWSSA AQREKERQLL WVGGQYAQAL 
RSYYRASPGL AQYPQALADL LEDNRFPEPK RHIRRLYPDP VTGSDEWGLL RSIDGRITGV
HSRSDATPFK RSGFDTQWSG FEGLEHYSDW QFVAEQAFSE SASGAQTHSS PGDAP