Gene PputW619_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2023 
Symbol 
ID6110976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2252725 
End bp2253111 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID641621818 
Productcupin 2 domain-containing protein 
Protein accessionYP_001748892 
Protein GI170721204 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACC CCAACCCGCA ACGCGCAACA TGCCCTGTAA ACCTTGCCCA GAAAGCTTCG 
CTGATAGAGC AGCAGTGGAG CCCGAGAGTG GTCGCCGAAA TGAACGACTA CCAGTTCAAG
GTTGTGCGAA TAGAAGGTGA ATTCATCTGG CATTCACACC CGGAAACCGA CGAAGCGTTT
CTCGTGCTCG AAGGCACCTT GCGCATCGAT CTACCGGAGG GCTGCGTTTA CGTGAACCCG
GGCGAGTTGT ATGTGGTGCC ACGTGGGGTG GAGCACAGAA CAGCCGCCGA GGCCGAAGCA
AAACTGATGA TGATCGAGCC GCGAGGCGTT CTGAATACCG GCCATGAAGG TGGGGAGCGC
ACTGCTATGA ACGACGTCTG GATCTGA
 
Protein sequence
MSHPNPQRAT CPVNLAQKAS LIEQQWSPRV VAEMNDYQFK VVRIEGEFIW HSHPETDEAF 
LVLEGTLRID LPEGCVYVNP GELYVVPRGV EHRTAAEAEA KLMMIEPRGV LNTGHEGGER
TAMNDVWI