Gene PputW619_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2010 
Symbol 
ID6110963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2242159 
End bp2242929 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID641621805 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_001748879 
Protein GI170721191 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG AACGTATTGC CAAGCGCCTC GACGATGCCG CCCTGTACGC CCAGGCCACG 
TTGCAATTAG GCGGCGAAGA TACCGTGACC CTGGAAGAGG CTTATGCGGT TCAACGCCTG
CTGATCGAGA AGCGCCTGGC CCGTGGGGCG CGCCAGGTGG GCGTCAAAAT GGGCTTTACC
AGCCGCGCCA AGATGGCGCA GATGGGCGTG TCCGACCTGA TCTGGGGGCG GTTGACCTCA
GATATGTGGA TCGAGGAAGG GGGCAGCATC GACCTGTCTC GCTACGTGCA CCCGCGCGTC
GAACCAGAGG TGTGTTTCTT GCTGGGCAAG CGCCTTGAAG GGCACGTTAC GCCGCTGCAG
GCCCTGGCCG CTGTGGAAGC GGTGGCGCCG GCACTGGAGG TGATCGACTC GCGCTATTGC
AACTTCAAGT TCTCGCTGCC CGCGGTGGTG GCCGACAACG CCTCATCGTC CGGCTTCGTG
GTCGGCGGCT GGCAGCGCCC GGACACTGAC GTGGGCAACC TGGGGCTTGT GATGAGTTTC
GATGGCCGCG CGGTGGAGAT GGGCAGCACG GCGGCGATCC TCGGCGCGCC TGTACGCGCA
CTGGTAGCAG CAGCGCGCCT GGCGGCGCAA CAAGGCGAGG CGCTAGAGCC CGGCAGCCTG
GTACTGGCCG GTGCGGCGAC GGCGGCCGTG GCGCTTCGCC CAGGCGTAGC GGTGCGCTGC
GAATTTCAGG ACTTGGGAAG CGTAGCGTTT GAAACGCTGC GCGAGGAATA A
 
Protein sequence
MKIERIAKRL DDAALYAQAT LQLGGEDTVT LEEAYAVQRL LIEKRLARGA RQVGVKMGFT 
SRAKMAQMGV SDLIWGRLTS DMWIEEGGSI DLSRYVHPRV EPEVCFLLGK RLEGHVTPLQ
ALAAVEAVAP ALEVIDSRYC NFKFSLPAVV ADNASSSGFV VGGWQRPDTD VGNLGLVMSF
DGRAVEMGST AAILGAPVRA LVAAARLAAQ QGEALEPGSL VLAGAATAAV ALRPGVAVRC
EFQDLGSVAF ETLREE