| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1819 |
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| Symbol | |
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| ID | 6110770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2028704 |
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| End bp | 2030857 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621615 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001748692 |
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| Protein GI | 170721004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.11344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.553566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCC GCATTCCCAA GAAAACCCGC TCCATAGCAC CATCCCGCCT GCGCGAGGGC
ATGCCCTTCC CGCTCGGCGC CACCTGGGAT GGGCTGGGGG TCAACTTCGC CCTGTTCTCA
GCCAACGCCA CCAAGGTCGA GCTGTGCCTG TTCGACTCCA CAGGGGAGCA GGAGCTTGAG
CGCATCGAGC TGCCGGAGTA CACAGACGAG ATCTACCACG GCTACCTGCC TGACGCTCAC
CCTGGCCTGG TATACGGCTA CCGTGTCTAT GGCCCCTACG AGCCAGAGAA CGGCCACCGC
TTCAACCCCA ACAAACTGCT GATCGACCCC TACGCCAAGC AACTGGTGGG CAGCCTGAAA
TGGTCCGAGG CGCTGTTCGG CTATACCATC GGCCACCCCG ACGGTGACCT GTCGTACGAC
GAGCGCGACA GCGCGCCCTT CGTGCCCAAA TGCAAAGTCA TCGACCCGGC CTTCACATGG
GGCCGCGACC AGCGTGTACA AATCCCCTGG GAGCGCACCA TCATCTATGA AGCGCATGCC
CGCGGCATCA GCATGCGCCA CCCGGCCGTG CCGGAAAATC TGCGCGGCAC GTTCGCCGGC
CTTGCCAATG ACGAGTTGCT CAAGCACATC AAGGACCTTG GCGTGTCGAG CATCGAGCTG
CTACCGATCC ACGCCTTCGT CAATGACCAG CACCTGCTGG ACAAAGGCCT TAACAATTAC
TGGGGCTACA ACAGCATCGC CTTCTTCGCG CCGCACCCGC GTTACCTGGC CAGTGGCAAG
ATCGCCGAGT TCAAGGAAAT GGTCGCGCAC CTGCACGACG CCGGCCTCGA AGTGATCCTC
GATGTGGTCT ACAACCACAC CGCCGAGGGC AACGAGCGCG GCCCCACGCT GTCCATGCGC
GGCATCGACA ACGCCTCGTA CTATCGGCTG ATGCCCGATG ACAAACGCTA TTACATCAAC
GATTCCGGCA CCGGCAACAC CCTGGACCTC AGCCACCCGT GCGTGCTGCA ACTGGTGACC
GATTCGCTGC GCTACTGGGC TGGCGAGATG CACGTGGACG GCTTCCGCTT TGACCTGGCA
ACCATCCTGG GCCGTTACCA CGACGGCTAC AGCGAACGCC ACGGGTTCCT CGTCGCCTGT
CGTCAGGACC CGATGCTCAG CCAGGTCAAG CTGATCGCCG AGCCATGGGA CTGCGGCCCA
GGTGGTTATC AGGTGGGCAA CTTCGCACCG GGCTGGGCGG AATGGAACGA CCGCTTCCGC
GACACCGTGC GCGCCTTCTG GAAAGGCGAC GAAGGCCAGC TGGCCGACTT CGCCTCGCGC
ATGACCGCCT CGGGCGACAT GTTCAACAAC CGCGGCCGGC GCCCCTATGC CTCGGTCAAC
TTCGTCACTG CCCACGACGG TTTCACCCTG CGCGATCTGG TGTCGTACAA CGGCAAACAC
AACGAAGACA ACGACGAGAA CAACCAGGAC GGCACCGACA ACAACCTGTC GTGGAACTGT
GGCGCGGAAG GCCCCACCGA CGACCCGGAA ATCAATGCCC TGCGCATGCG CCAGATGCGC
AACTTCTTCG CCACCCTGCT GCTGGCCCAA GGCACGCCCA TGATCGTCGC TGGCGACGAG
TTCAGCCGCA CCCAGCACGG CAACAACAAT GCCTATTGCC AAGACAGCGA GATCGGCTGG
GTCAACTGGG ACCTGGACGA AGAGGGCAAA GACCTGCTGG CCTTCGTCAA GCGCCTGACT
CGCCTGCGCC TGGCCTACCC GGTGCTGCGC CGCTCACGCT TTCTGGTCGG CGACTACAAC
GAGGCCATCG GGGTCAAGGA CGTGACCTGG CTGGCGCCTG ACGGCAGCGA GATGAGTGTG
GAGCAGTGGG AAGATCCGCA TGGGCGCTGC CTGGGCATGC TGATCGACGG CCGCGCCCAG
GTCAGTGGCA TCGCCCGGCC GGGTTCGGAG GCGACTGTGC TGCTGATCGT CAATGCGCAT
CACGATGTGG TGCCGTTCCT GCTGCCGACG GTACCGGACG GTGACTACTG GAGCTGCCTG
GTGGACACCG ACCGGCCGGA ACTGCGCAAG GGCCAGCACT TGCCGTTCGA CAGCACGTTC
CAGGTCCAGG GGCGCTCGAT GCTGCTGATG GTGCTGCAGC GCGAGGAGGA CTGA
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| Protein sequence | MSPRIPKKTR SIAPSRLREG MPFPLGATWD GLGVNFALFS ANATKVELCL FDSTGEQELE
RIELPEYTDE IYHGYLPDAH PGLVYGYRVY GPYEPENGHR FNPNKLLIDP YAKQLVGSLK
WSEALFGYTI GHPDGDLSYD ERDSAPFVPK CKVIDPAFTW GRDQRVQIPW ERTIIYEAHA
RGISMRHPAV PENLRGTFAG LANDELLKHI KDLGVSSIEL LPIHAFVNDQ HLLDKGLNNY
WGYNSIAFFA PHPRYLASGK IAEFKEMVAH LHDAGLEVIL DVVYNHTAEG NERGPTLSMR
GIDNASYYRL MPDDKRYYIN DSGTGNTLDL SHPCVLQLVT DSLRYWAGEM HVDGFRFDLA
TILGRYHDGY SERHGFLVAC RQDPMLSQVK LIAEPWDCGP GGYQVGNFAP GWAEWNDRFR
DTVRAFWKGD EGQLADFASR MTASGDMFNN RGRRPYASVN FVTAHDGFTL RDLVSYNGKH
NEDNDENNQD GTDNNLSWNC GAEGPTDDPE INALRMRQMR NFFATLLLAQ GTPMIVAGDE
FSRTQHGNNN AYCQDSEIGW VNWDLDEEGK DLLAFVKRLT RLRLAYPVLR RSRFLVGDYN
EAIGVKDVTW LAPDGSEMSV EQWEDPHGRC LGMLIDGRAQ VSGIARPGSE ATVLLIVNAH
HDVVPFLLPT VPDGDYWSCL VDTDRPELRK GQHLPFDSTF QVQGRSMLLM VLQREED
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