| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1804 |
|---|
| Symbol | |
|---|
| ID | 6110755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2006928 |
|---|
| End bp | 2008076 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641621600 |
|---|
| Product | peptidase M14 carboxypeptidase A |
|---|
| Protein accession | YP_001748677 |
|---|
| Protein GI | 170720989 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0544452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0731495 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGA CGCTGTCCCC TCTGCAGATC GACTGCGCTT TCGATTCCGG CAACATCCAG
GTCCTGGATG CCAGCAACCC TGCCCAGGTC CACCTGGCCA TTCGCCCGGA CACCCACAGC
GGCCACTTCC AGTGGTTCCA CTTCAAGGTC AGCGGCCTCA CGCCCGGTCA GGTCCATCGC
TTCAGCCTGG ACAACGCCAG CGAGTCTTCC TACAAGAACG CCTGGGCCGG CTACAACGCC
GTGGCTTCCT ACGACCAGCA AACCTGGTTC CGTGTGCCCA GCCAGTTCGA TGGCAAGGCA
CTGGCCTTTG AAGTGAAAGC CGAGCAGGAG CAGATCTGGT TCGCCTACTT CGAGCCCTAC
CCGCGTGCGC GCCACAACCA GTTGATCGAG CGCGCCCAGC AGATTCCCGG TGTCGAACTG
CTGGCCCATG GCCGCAGCGT GCAGGGCCGC GACATTCCGC TGTTGCGCGC AGGCGACGGA
GCCGCCGGCA AGCGCAAGCT CTGGCTGATC GCCCAGCAGC ACCCGGGCGA GCACATGGCC
GAGTGGTTCA TGGAGGGGGT AATCGACCGT CTTCAAGCCA ATGACGCAGT CGTCCAGCAA
TTGCTGGCCA AGGCTGACCT GTACCTGATC CCAAACATGA ACCCGGATGG CGCCTTTCTC
GGCCACCTGC GCACCAACTT CAAAGGCCAG GACCTCAACC GGGCCTGGCA GGACGCCAGC
GTCGACGCTA GCCCGGAGGT GTTCTTTGCC CAGGCGCAGA TGAAGCAGTA CGGGGTGGAT
GCGTTCATCG ATGTGCATGG GGATGAAGAA ATCCCGCATG TATTCACGGC AGCCTGCGAG
GGCAACCCCG GCTATACGCC ACGCCTGGCC AAGCTTGAAG AGCAGTTCCG TAGCACCTTG
TGCAGCGTTA CGCCTGACTT CCAGACCAAG TATGGCTATA CCCGCGATGA GCCGGGGCAG
GCCAATACGA CGCTGGCGTG CAATGCGGTG GGCATGGCGT ACGACTGCCT GTCGTTGACC
CTGGAGATGC CATTCAAGGA CCATGACGAT GCACCCAACC CGGTTACCGG CTGGTCGGGA
GAGCGGTCCA AGGTATTGGC AGGGGCGGTG CTGGAGACCT TGCTGAAGAT TGCTGACGAT
TTGCGCTGA
|
|---|
| Protein sequence | MAVTLSPLQI DCAFDSGNIQ VLDASNPAQV HLAIRPDTHS GHFQWFHFKV SGLTPGQVHR
FSLDNASESS YKNAWAGYNA VASYDQQTWF RVPSQFDGKA LAFEVKAEQE QIWFAYFEPY
PRARHNQLIE RAQQIPGVEL LAHGRSVQGR DIPLLRAGDG AAGKRKLWLI AQQHPGEHMA
EWFMEGVIDR LQANDAVVQQ LLAKADLYLI PNMNPDGAFL GHLRTNFKGQ DLNRAWQDAS
VDASPEVFFA QAQMKQYGVD AFIDVHGDEE IPHVFTAACE GNPGYTPRLA KLEEQFRSTL
CSVTPDFQTK YGYTRDEPGQ ANTTLACNAV GMAYDCLSLT LEMPFKDHDD APNPVTGWSG
ERSKVLAGAV LETLLKIADD LR
|
|---|
| |