Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1718 |
Symbol | |
ID | 6110664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1913712 |
End bp | 1915232 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641621509 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001748591 |
Protein GI | 170720903 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAACA CCTTCACTCA ATCGATGGCC TGGCTGCACA CCTGGGGCGG GCTGATCTTC GGCTGGCTGC TGTTTGCCAT CTTCGTCACC GGTACCCTGG CGGTGTTCGA CAAAGAGCTG AACCACTGGA TGCAGCCGGA AATCCCGACC AGTGAAGTGA CCCAGGCCGA TGCCGCGCGG CGCGCCATTG CCTACCTGCA AACCCATGAG CCGCAGGCCG GCAACTGGGG CGTCAGCCTG CCCACCGATC GTTCGCCCGG GCTGCGGGTG TCTACCGGTG AGCGGCGCCA TGGCGGCGGC GTACAGCTTG ACCCGCAGAC GGGCGAGGCC ATCGAGGTAC GCGACAGTGT CGGCGGCAAT TTCTTTTTCC GCTTCCATTT CACCCTCGAC CTGCCGCGCA ACTGGGGCAT TTTCGTGGTC GGTGCACTGG CGCTGGTGAT GCTGGCGGCG CTTGTCACCG GCATTGTCAT CCACAAGAAG ATCTTCAAGG AGTTCTTCAC TTTCCGGCCG AACAAGGGCC AGCGCTCCTG GCTGGACTTT CACAACGCCA GTGCAGTGCT GTTGCTGCCA TTCCACCTGA TGATCACCTA CACCGGGCTG GTGATCTTCA TGCTCATCTA CATTCCTGCA GGTGTCGATG CGCTGTTCGC CGGGGACAAC CGGGCCTACT TCAAGGCCCA GGGCAACGCC CGCCTGGAGC AGCCAAGGGG CATGGCCAGG CAGCCCGCGG AGCTGGCCGA TGTGGTACCG CTGCTAGCCC AGGCGCAGGC ACGCTCGGGG CCCATAGCCG GTTTCAATAT CCGCAATCCC AACACTGCCG GGGCACGGAT CGAGGTCCGC CCTGAGCTGG GTAATCGCAT CGCCCTGTCC AAAGGGCAGG CCATGGTATT CGATGGTGTC AGCGGGCAGT TGCTCAGCGA TGTGACCGAG TGGCGTGCGG CCCCCTTGAC CCAGCGGGTC ATGGTCGGTC TGCATTTTGC CCAGTTTGGC GGGTACCCGA TGCGTTGGTT GTACTTCGTT TGTGGCGTTA TCAGCTGCGT GATGATCGCC AGTGGCCTGG TGCTGTTTTG CGTTAAGCGT GGGCGCAAGT ACGCCAGCGC CAGCGCGCAG CTGTCGGCGC GGCGTTGGTA CCGGGTAGCC GAGGTGTGCA ATGTCGGTTT CGTTGCCGGT TTGCTGCTGG CCTGTGTCGG CTTGCTGTGG GCCAGCCGCC TGCTGCCGGT CGAGCTGGTA CAGCGCGAAG CCTGGGAGGT TCGGGCGTTC TTTGGTGTAT GGCTGCTGGC GCTGTTGTAT GCCGGTATCA GGCCTGCGCA TCGGGCGTGG GTGGAGCAGT TGGGGCTGAC GGCACTGCTG TGCATGGGCC TTGGGCTGTT CGGTGGGCTG GAGGATGCCT TGCGCCTGGG CGTGGCGGCT TGCGCACTGG TGCTGGGGGT ATTGCTTGGT GTGGTGGCGT GGCGTGTGCA GAACGCCGAG CCGGCGCCGC TTGCACGCAA GGCAGGGCGC AGCGTGGAGG CAGGCGCATG A
|
Protein sequence | MKNTFTQSMA WLHTWGGLIF GWLLFAIFVT GTLAVFDKEL NHWMQPEIPT SEVTQADAAR RAIAYLQTHE PQAGNWGVSL PTDRSPGLRV STGERRHGGG VQLDPQTGEA IEVRDSVGGN FFFRFHFTLD LPRNWGIFVV GALALVMLAA LVTGIVIHKK IFKEFFTFRP NKGQRSWLDF HNASAVLLLP FHLMITYTGL VIFMLIYIPA GVDALFAGDN RAYFKAQGNA RLEQPRGMAR QPAELADVVP LLAQAQARSG PIAGFNIRNP NTAGARIEVR PELGNRIALS KGQAMVFDGV SGQLLSDVTE WRAAPLTQRV MVGLHFAQFG GYPMRWLYFV CGVISCVMIA SGLVLFCVKR GRKYASASAQ LSARRWYRVA EVCNVGFVAG LLLACVGLLW ASRLLPVELV QREAWEVRAF FGVWLLALLY AGIRPAHRAW VEQLGLTALL CMGLGLFGGL EDALRLGVAA CALVLGVLLG VVAWRVQNAE PAPLARKAGR SVEAGA
|
| |