Gene PputW619_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1569 
Symbol 
ID6110514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1734638 
End bp1735537 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID641621360 
Product1-aminocyclopropane-1-carboxylate deaminase 
Protein accessionYP_001748443 
Protein GI170720755 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.836174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.209686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACCC GCTTTCATGA CCTTCCCCAG GCACCTTTAC AGCCCCTCGA GCTTGCTTGG 
CTGAAAAGTG CCAACGTTGA AGCCGCCATC CTACGCCTGG ACCTGATCGA CCCCCTGATC
AGCGGCAACA AATGGTTCAA GCTGCGCCAC CACCTGCTGC ACGCCCACGC CTCGGGCGCC
GCCGGGCTGA TCAGCCTCGG CGGCAATCAC TCCAACCACC TCCATGCCCT GGCCGCCGCC
GGCAAGCGCT TCGGCTTCGC CACCGTTGGT CTGTTGCGCG GCCATGCCCA GGACACCCCC
ACGGTGCGTG ATCTGCAGGC GCTGGGGATG CAATTGCACT GGCTTGGTTA CGCAGGCTAC
CGTGCCCGTC ATGACCCCGG CTTCTGGGCA CCTTGGCAAG CGCTGTATCC CGGCTGGCAC
TGCATCCCCG AAGGCGGTGG CGGGCAGGCT GGTGCCCAGG GGTGTGCATT GATCGTCGAG
CAGGCCAAGG CCCAGTTGGG CACATTGGGT TGGCCGGACT ATGACGCCTG GTGGCTGGCC
GCTGGCACCG GGACCACGCT GGCTGGCCTG GTGCTGGCCG AGGCCGGCGC GCACAGGGTG
CATGGCGCCC TGGCAGTGCC GCTGGACCAT GGTGTACCCG AGACCATAAC GGCGCTGGCC
GGTACGGCCG GGTACCAGTT GCACGAGGCC TGCCGAGAGG GTTTTGCCAG GCGCGATGAT
GAGCTGCAGG CTTTCATCGA ACAGGCTGAG GCCAGCACGG GTGTCCCTTT AGAGGCGCTT
TACACCGGCA AGGCACTGAT GGCCCTGCGT GGGCAGGTCG AGGCCGGGCT GTTCAAGCCT
GGCACTCGCC TGATCTTTTT GCACACCGGT GGCCTGCAGG GCCGACGCGG CTACTTGTAA
 
Protein sequence
MFTRFHDLPQ APLQPLELAW LKSANVEAAI LRLDLIDPLI SGNKWFKLRH HLLHAHASGA 
AGLISLGGNH SNHLHALAAA GKRFGFATVG LLRGHAQDTP TVRDLQALGM QLHWLGYAGY
RARHDPGFWA PWQALYPGWH CIPEGGGGQA GAQGCALIVE QAKAQLGTLG WPDYDAWWLA
AGTGTTLAGL VLAEAGAHRV HGALAVPLDH GVPETITALA GTAGYQLHEA CREGFARRDD
ELQAFIEQAE ASTGVPLEAL YTGKALMALR GQVEAGLFKP GTRLIFLHTG GLQGRRGYL