| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1464 |
|---|
| Symbol | |
|---|
| ID | 6110393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1604067 |
|---|
| End bp | 1605044 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641621239 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001748338 |
|---|
| Protein GI | 170720650 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.944849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA CTATTGGCAG AGTAAACCTT TGGTTGGCAA TCATGGCCAT GGAGTCGTTC
AACGCCCTTG AGTGTTTCAT CCGCAGCGCC GAGGTGGGCA GCTTCGCGGA GGCGGCCCGC
CGTTTGAGCA TTACCCCGGC GGCGGTGGGC AAGCATGTCG CCCAGCTTGA AGCGCGCCTC
GGTGTGCGGC TGTTCCAGCG TAGTACCCGC AAGCTGACCT TGACCGAAGC CGGGCAGCGT
TTTTTAGGCG AAGTCAGTGA CAGCTTTCGT ACCATCCAGT ACGCCGTGGC CAACCTGGCC
AGCGCCGAAG GTCAGCCGGC CGGGCTGTTG CGGGTGAGTA TGGGGACGGT GTTCGGCAGG
CTGTATGTAC TGCCGTTGCT GGGTGAGTTC TTGCGGCGCT ACCCGGCGAT CACCCCGGAC
TGGCATTTCG ACAACCGTCA GGTAGACCTG ATCGGCCAAG GTTTCGATGC GGCGATTGGC
GGTGGTTTCG AGCTACCGCT GGGGGTGGTG GCGCGCCGGC TGACCCCTGC GCATCGGGTG
TTGGTGGCAG CCCCAGGGTA CTTGAGCCAG CACCCCGTCA TTGAAGACCC GCAGGTACTG
GGGCGCCATG CCGGCATCTT GATTCGCTCA CCGCAGACCG GCCGTGTGCG GTCGTGGCCG
TTGACCAGCC GTTGGCAGGC GCAGCAGCCA CTGCTATTGC GCCAGGCAAT GACCATGAGC
GACTCGGATG CAGCCTGTGC CGTAGCCCAG CAGGGGTTGG GCATTGCATT GGTCAGCCTG
CCGTTTGCCG TGCCTTACCT GCAGGCGGGC CAACTGCAAA GGGTGTTGCC GGACTGGTAT
GTGGATGATG GGCATATCAG CCTGTATTAC GCCGAGCACA AGCTTCTGCC GGGCAAGACC
CGGGCGTTCA TCGAGTTCGT GCAGGAGCAG TTCGCCCATG GCGGGCTGGC GCGCAAATTC
GATGCTCTTG CCGGTTAG
|
|---|
| Protein sequence | MAITIGRVNL WLAIMAMESF NALECFIRSA EVGSFAEAAR RLSITPAAVG KHVAQLEARL
GVRLFQRSTR KLTLTEAGQR FLGEVSDSFR TIQYAVANLA SAEGQPAGLL RVSMGTVFGR
LYVLPLLGEF LRRYPAITPD WHFDNRQVDL IGQGFDAAIG GGFELPLGVV ARRLTPAHRV
LVAAPGYLSQ HPVIEDPQVL GRHAGILIRS PQTGRVRSWP LTSRWQAQQP LLLRQAMTMS
DSDAACAVAQ QGLGIALVSL PFAVPYLQAG QLQRVLPDWY VDDGHISLYY AEHKLLPGKT
RAFIEFVQEQ FAHGGLARKF DALAG
|
|---|
| |