| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1417 |
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| Symbol | |
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| ID | 6110345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1557964 |
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| End bp | 1558665 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641621191 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001748291 |
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| Protein GI | 170720603 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.909746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.120698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCT GCCAGACGCC CCTGATCGTC GCCCTGGATT TCCCCACCCG TGACGCCGCC
CTGAAACTGG CCGACCAGCT CGACCCTGCC CTGTGCCGGG TTAAAGTTGG CAAGGAGCTG
TTCACCAGCA GCGCGTCCGG CATTGTCGAG TCCCTGTGCG CGAAGGGCTT CGAGGTGTTC
CTGGACCTCA AGTTCCACGA TATCCCCAAC ACCACCGCCA TGGCCGTGAA GGCTGCCGCC
GAAATGGGCG TGTGGATGGT AAACGTGCAC TGCTCCGGCG GCCTGCGCAT GATGTCGGCC
TGCCGCGAAG TGCTGGCCAA GCGTAGCGGC CCGCAGCCAC TGCTCATCGG CGTGACCGTA
CTGACCAGCA TGGAGCGTGA AGACCTGGCC GGCATCGGCC TGGACATCGA ACCGCAAGAG
CAGGTGCTGC GCCTGGCGGC GCTGGCCGAG AAGGCCGGCA TGGACGGGCT GGTGTGCTCG
GCACTGGAAG CGCCGGCGCT CAAGGCTGCG CACCCGTCGC TGCAGTTGGT AACCCCGGGC
ATTCGCCCCG CTGGCAGCGC GCAAGATGAC CAACGCCGCA TTCTGACCCC GCGCCAGGCT
TTGGATGCCG GCTCGGATTA CCTGGTGATC GGCCGCCCGA TCAGCCAGGC GGCAGACCCC
GCCCAAGCCT TGGCAGCAGT GGTGGCTGAG ATCCGCAGCT GA
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| Protein sequence | MSACQTPLIV ALDFPTRDAA LKLADQLDPA LCRVKVGKEL FTSSASGIVE SLCAKGFEVF
LDLKFHDIPN TTAMAVKAAA EMGVWMVNVH CSGGLRMMSA CREVLAKRSG PQPLLIGVTV
LTSMEREDLA GIGLDIEPQE QVLRLAALAE KAGMDGLVCS ALEAPALKAA HPSLQLVTPG
IRPAGSAQDD QRRILTPRQA LDAGSDYLVI GRPISQAADP AQALAAVVAE IRS
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