Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1404 |
Symbol | |
ID | 6110332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1542448 |
End bp | 1543335 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641621178 |
Product | hypothetical protein |
Protein accession | YP_001748278 |
Protein GI | 170720590 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.47179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTATGC CTTCCCAGCC CCTCGATGGC TTGAAGATCA GTTCCCGCGT TACATTGCTG GAACCGGGCA TGTACATTTT TCGATATGCC TCGCAGCCGC CTGCCGACAA ACCTGTGTGC ATCGCGCTTC AACAAGCACC GCTAGGCAAA GGCTCGATCG ATTTCTTCCC TGCAGAGGGC GTCAGCAAGA ACATGCTGAC CAAACTGGGC GACACCATTG TGGCCCGGGT CAAAGGTGGC GTGACCACCG TACTGATCAC CGAATACCAC ATGTTCGACG ACGTGATCGA CCCGGTCGAC CTGCGCATCG ACCGCATCGA CACCTCGCCC GCCATCATGC GCACTTTTGC CGTGGTGGCC AGCAGCGAAC CAGCCCCAAC CCTTACCGCA ACCGCTGGCC CCACCGCTTT CGAGCTCACC GCGCACCTGC AACACACAGG CGAAGTGGTT TCCAGCGAAG GCCGCATCGG CACGCCCGGC AGCGACGAAT TCATCGAGAG CTTCGCTATC AACTGGCCGA ACAAGCCGGA TGGCGTCGAC CTGCTCTACA CCTGCATGGT GGCCGGCTCC GGCCCCAGCC GTAATGTGTC CACCGGCACC TTCGTTGGCG CGCGAGGCGA AGGCCTGCCG CTGATCTGCG TGGGCTTCAG CCTGGTCGGG CCACAACGCA AACACTACGA ATTGACAGGC CATATCGTGT TCGGCAATGC CGAGCCACAA CGCCTGCTCG CCAATCAGAT GATGCATGGC CCCACCGGCA ACGAGCCGTT GGTGGCGCTG CATATCGCCG TTACTCCCGT TACGAAGATG AACGCTGCCC GCTCTAAGTC TCCGTGGGAA AACTCTGCGC AACCGCAGAA CCTCAGTGCA ACAAGCCAAT TGGCTTGA
|
Protein sequence | MSMPSQPLDG LKISSRVTLL EPGMYIFRYA SQPPADKPVC IALQQAPLGK GSIDFFPAEG VSKNMLTKLG DTIVARVKGG VTTVLITEYH MFDDVIDPVD LRIDRIDTSP AIMRTFAVVA SSEPAPTLTA TAGPTAFELT AHLQHTGEVV SSEGRIGTPG SDEFIESFAI NWPNKPDGVD LLYTCMVAGS GPSRNVSTGT FVGARGEGLP LICVGFSLVG PQRKHYELTG HIVFGNAEPQ RLLANQMMHG PTGNEPLVAL HIAVTPVTKM NAARSKSPWE NSAQPQNLSA TSQLA
|
| |