| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1300 |
|---|
| Symbol | |
|---|
| ID | 6110228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1438797 |
|---|
| End bp | 1440584 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641621074 |
|---|
| Product | asparagine synthase amidotransferase |
|---|
| Protein accession | YP_001748174 |
|---|
| Protein GI | 170720486 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAT TAGCAGGAGA GTTGCGTTTC ACCCCCATCG ACCAAGCCCC TCGCCCGGCG
GACCTCGCCG CGGTAGAGCG CATGACCCAT CACCTGGCGC CCCGTGGCCC CGACGCCTGG
GGCTTCCATA GCCTGGGCCC GATCGCCCTG GGCCATCGTC GGCTGAAAAT CATGGACCTG
TCCGACGGCT CGGCTCAGCC CATGGTCGAC AACACCCTGG GCCTGTCTTT GGCCTTCAAC
GGTGCCATCT ACAACTTCCC CGAACTGCGC CAGGAGCTTC AGGACCTGGG CTACACCTTC
TGGTCCGACG GCGACACCGA GGTGCTGCTC AAGGGCTACC ACGCCTGGGG CGCGGCCTTG
CTGCCCAAGC TCAACGGCAT GTTCGCCCTG GCCATCTGGG AGCGCGACAA CCAGCGCCTG
TTCCTGGCCC GTGACCGCCT TGGCGTCAAG CCGCTGTACC TGTCGCGCAA TGGCGAGCGC
CTGCGCTTTG CCTCAACCCT GCCAGCGCTG CTAAAAGGTG GCGACATCGA CCCGATGATC
GACCCGGTAG CGCTCAACCA CTACCTCAAC TTCCACGCTG TGGTGCCGGC GCCACGCACC
TTGCTGGCCA ATGTGCAGAA GCTCGAACCC GGCACCTGGA TGCGCGTCGA CCGCCACGGT
GAAGTCGAGC GCCAAACCTG GTGGCAGCTG CATTACGGCC CTAATCCGGA CGAGCGCGAC
CTCGATCTGG AAGGCTGGAC CACCCGTGTG CTCGATGCCA CCCGTGATGC CGTCGGCATC
CGCCAACGCG CCGCCGTGGA CGTGGGTGTA CTGCTGTCCG GCGGCGTCGA TTCCAGCCTG
TTGGTCGGCT TGCTGCGGGA AGTGGGCGTA GATGACCTGT CGACGTTCTC CATCGGCTTC
GAGGATGCCG GCGGCGAGCG CGGCGACGAG TTCCAATACT CCGACCTGAT CGCCAAGCAT
TACGGCACCC GCCATCACAA GCTGCGCATC GCCGAAAGCG AAATCATCGA GCAACTGCCG
GCCGCGTTCC GTGCCATGAG CGAACCGATG GTCAGCCACG ACTGCATCGC CTTCTACCTG
CTGTCACGCG AGGTGGCCAA GCACTGCAAG GGCGTGCAGA GCGGCCAGGG TGCCGACGAG
CTGTTTGCCG GCTACCACTG GTACCCGCAG GTGGACGGCG CCGAGGATGC CTTTGGCGCC
TACCGAGATG CGTTCTTCGA CCGCAGCCAT GCCGAGTACC GCGACACCGT GCAAGCCCCG
TGGCTGCTGG AGACCGACGT GGCCGGCGAC TTCGTGCGCG AACACTTCGC CCGCCCGGGC
GCGCCCGACG CGGTGGACAA GGCGCTGCGC CTGGATAGCA CGGTGATGCT GGTCGACGAC
CCGGTAAAAC GGGTCGACAA CATGACCATG GCCTGGGGCC TGGAAGCCCG TACGCCGTTC
CTGGACTACC GCCTGGTCGA GCTGTCGGCA CGCATCCCGG CGCGCTTCAA GCTGCCCGAT
GGCGGCAAGC ATGTGCTCAA GCAAGCCGCA CGCCGGGTGA TCCCCCATGA GGTGATCGAC
CGCAAGAAAG GCTACTTCCC GGTACCCGGC CTCAAGCACC TGCAAGGCGC CACCCTGGAC
TGGGTACGCG AACTGCTCAC CGACCCCAGC CAGGACCGCG GGCTGTTCAA CCCGACCATG
GTAGACCGCC TGCTGAGCAA CCCGCATGGC CAACTGACCC CGCTGCGCGG CTCCAAGCTG
TGGCAGCTGG CGGCGCTGAA CCTGTGGCTC AGCGAACAAG GAATCTGA
|
|---|
| Protein sequence | MCGLAGELRF TPIDQAPRPA DLAAVERMTH HLAPRGPDAW GFHSLGPIAL GHRRLKIMDL
SDGSAQPMVD NTLGLSLAFN GAIYNFPELR QELQDLGYTF WSDGDTEVLL KGYHAWGAAL
LPKLNGMFAL AIWERDNQRL FLARDRLGVK PLYLSRNGER LRFASTLPAL LKGGDIDPMI
DPVALNHYLN FHAVVPAPRT LLANVQKLEP GTWMRVDRHG EVERQTWWQL HYGPNPDERD
LDLEGWTTRV LDATRDAVGI RQRAAVDVGV LLSGGVDSSL LVGLLREVGV DDLSTFSIGF
EDAGGERGDE FQYSDLIAKH YGTRHHKLRI AESEIIEQLP AAFRAMSEPM VSHDCIAFYL
LSREVAKHCK GVQSGQGADE LFAGYHWYPQ VDGAEDAFGA YRDAFFDRSH AEYRDTVQAP
WLLETDVAGD FVREHFARPG APDAVDKALR LDSTVMLVDD PVKRVDNMTM AWGLEARTPF
LDYRLVELSA RIPARFKLPD GGKHVLKQAA RRVIPHEVID RKKGYFPVPG LKHLQGATLD
WVRELLTDPS QDRGLFNPTM VDRLLSNPHG QLTPLRGSKL WQLAALNLWL SEQGI
|
|---|
| |