| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1235 |
|---|
| Symbol | |
|---|
| ID | 6110159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 1366462 |
|---|
| End bp | 1367454 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641621005 |
|---|
| Product | threonine-phosphate decarboxylase |
|---|
| Protein accession | YP_001748109 |
|---|
| Protein GI | 170720421 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0882748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAC ATGGCGGCCG ACTGCTCAAG GCAGTACGGC AATACGGGAT TGCACGGGAG
GACTGGCTCG ACCTGTCCAG CGGTATTGCG CCGTGGGCTT ACCCGGTGCC GCCGATCCCG
GCGCACGCCT GGGCGCGACT GCCCGAGACC GAAGACGGTC TCGAAGAGGC GGCCCGACAG
TATTACGGTG TTGGCCAGTT GCTGCCGGTA GCGGGCTCGC AAGCAGCGAT CCAGGCCCTG
CCGCATCTGC GCCCGAGCGG TCGCGTGGGG GTGCTGTCGC CGTGTTATGC CGAGCATCCG
CAGGCCTGGC AACGGGCCAG GCATCAGCTG ATCGAGCTGG ATGAAAGCCT GGTCGAGGCG
TATCTGGACA GCCTCGATGT GCTGGTGCTG GTCAACCCGA ACAACCCGAC CGGTCATCGC
GTGCCCCCCA ACCGCCTGCT TGCATGGCAT GCCCGCTTGG CCGAGCGTGG CGGCTGGTTG
GTGGTCGATG AAGCCTTCAT GGACAACACG CCCGAGCACA GCGTGGTCGG TTGTGCCGAC
CGGCCGGGGC TGATTGTGCT GCGCTCGTTC GGCAAGTTCT TTGGCCTGGC GGGTGTGCGG
CTGGGCTGCG TGGCGGCCGA ACTGCCGTTG TTGCGGCGCC TGGCCGACCT GCTTGGCCCA
TGGACCGTCA GCGGCCCGAC CCGGGTGCTG GCCCAGGCGT GTTTCGCCAA CCTGGCAGCG
CACCCGCTGC AGATCGAGCG CTGTGCCCAC GCCAGCCAAC GGCTTGCCAC GCTGCTGGAA
AGCACCGGCC TGACACCCGC GGGTGGTTGC GACCTGTTCC AGTACGTACG CTGTGAGCAC
GCAGCGCACT TGCATGACTT TCTTGCCCGC CGCGGCATCC TGGTGCGCCT GTTCGAACAG
CCACCTGCCG TGCGCCTGGG CCTGCCCGCC AGCGCCGCTG AAGAGCAGCG CCTGGCCCAG
GCCCTGGCCG ATTATCAGAA GGAAACGGCA TGA
|
|---|
| Protein sequence | MLEHGGRLLK AVRQYGIARE DWLDLSSGIA PWAYPVPPIP AHAWARLPET EDGLEEAARQ
YYGVGQLLPV AGSQAAIQAL PHLRPSGRVG VLSPCYAEHP QAWQRARHQL IELDESLVEA
YLDSLDVLVL VNPNNPTGHR VPPNRLLAWH ARLAERGGWL VVDEAFMDNT PEHSVVGCAD
RPGLIVLRSF GKFFGLAGVR LGCVAAELPL LRRLADLLGP WTVSGPTRVL AQACFANLAA
HPLQIERCAH ASQRLATLLE STGLTPAGGC DLFQYVRCEH AAHLHDFLAR RGILVRLFEQ
PPAVRLGLPA SAAEEQRLAQ ALADYQKETA
|
|---|
| |