Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1125 |
Symbol | |
ID | 6110044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1242542 |
End bp | 1243090 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620890 |
Product | electron transport complex protein RnfA |
Protein accession | YP_001747999 |
Protein GI | 170720311 |
COG category | [C] Energy production and conversion |
COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGACT ATGTCCTGAT TCTGATCAGC GCCGCACTGG TCAGCCACCT GCTTTTGCAA GAACAGGCTG CCTCCCGGCT GCGCGTACAT GTGTGCGGCC TGGCCTGCGC GTTGTCGATA ATGCTGGCAG TCACCGGCGG CCAACTGCTC GAACACCTGA TCGTGGCGCC TTGGCAACTG CAGGACCTGC GCATGTTCCT GCTGCTGCCC TGGCAGGGGC TACTCGCGTG GGGCATCCCC CAGACGCTTG CCAGGCTGCG GCCGGAGTGG CCCACGCAGA GCCTCACGTG GCCGATACTG GGGAATGCCA TGGTACTGGG CCTGACACTT CAGGTAATAG GTGAACAGGG TAAATGGCTG GCCACGCTGA GCTGGGGTGT TCTGGCCGGG CTTGGCTTCT GGCTGGCCTT GGAGTTGTTT GACGACCTCA GTCAGCGCAG CGGACACGCA CAGGTGCCAG AAGCACTGCG CGGCCTACCC ATCGCGCTGC TTGGTGCCGG TGTGATGGTT ATGGCGCTCT CTGGCCTCAA CGGAATATTC ACGCAATGA
|
Protein sequence | MNDYVLILIS AALVSHLLLQ EQAASRLRVH VCGLACALSI MLAVTGGQLL EHLIVAPWQL QDLRMFLLLP WQGLLAWGIP QTLARLRPEW PTQSLTWPIL GNAMVLGLTL QVIGEQGKWL ATLSWGVLAG LGFWLALELF DDLSQRSGHA QVPEALRGLP IALLGAGVMV MALSGLNGIF TQ
|
| |