Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1107 |
Symbol | |
ID | 6110026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1226928 |
End bp | 1228037 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620872 |
Product | ABC transporter related |
Protein accession | YP_001747981 |
Protein GI | 170720293 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCAC CCCTACTGCT AAACCTGCGC AACCTCGCCT GCGGCTACGG CGACCAGCGC ATCGTCCAGA ACCTCAACCT GCACCTGAAC GCAGGCGACA TCGGTTGCCT GCTGGGTTCT TCGGGGTGCG GCAAGACCAC CACCCTGCGC GCCATCGCCG GCTTCGAGCC GGTACACGAA GGTGAGATCC AGCTCGCGGG CGAAGTCATT TCCCGCGCCG GTTTCACCCT GTCCCCGGAG AAACGCCGCA TAGGCATGGT GTTCCAGGAC TATGCGCTTT TCCCGCACCT GACCGTGGCG CAAAACATCG CCTTCGGCAT CGCCAAGCAC CCATCCCAAG GGCATGTGGT CGAAGAAATG CTCGAGCTGG TCAAGCTCGG TGGCCTCGGC GGGCGGTATC CGCACGAGCT CTCAGGCGGC CAGCAACAGC GCGTGGCCCT GGCCCGGGCG CTGGCGCCCG AGCCACAATT GCTGCTGCTG GACGAGCCTT TTTCCAACCT GGACGTCGAA TTGCGCCGCC GCCTGAGCCA CGAGGTCCGT GACATCCTCA AAAGCCGGGG TACCAGTGCG ATTCTGGTTA CCCATGACCA GGAAGAAGCC TTCGCGGTCA GCGACCATGT GGGTGTGTTC AAGGAAGGCC GCCTGGAACA ATGGGACACG CCCTACAACC TCTACCATGA GCCGCAGACA CCATTCGTTG CCAGTTTCAT CGGCCAGGGT TATTTCATCC GTGGTCAGAT GAGCAGCCAT GAGTCAGTCA ACACCGAGCT CGGTGAACTG CGGGGTAACC GCGCCTACAC CATGGCCCCC GGCAGCTCGG TAGACGTGCT GCTGCGCCCT GACGATATCG TTCCTGACGC GGACAGCGCA CTGCGCGCAA ACATCGTCGG CAAGAGTTTC CTGGGCGCAT CGACACTGTA TCGCCTGCAG TTGCCGACAG GCAGCCAGCT GGAAGCGATC TTCCCGAGCC ATATCGATCA TCAGGTAGGC GAGCAGGTCG GTATTACCGT CAAAGCTGAC CACCTGGTGT TGTTCCCGGT ACCCGGCAGC GTCGCGGCGC AGTTGCCGCG GCAGGAAAAC GGGGTGCGCC GCTTCAGCTC GGCAACCTGA
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Protein sequence | MSPPLLLNLR NLACGYGDQR IVQNLNLHLN AGDIGCLLGS SGCGKTTTLR AIAGFEPVHE GEIQLAGEVI SRAGFTLSPE KRRIGMVFQD YALFPHLTVA QNIAFGIAKH PSQGHVVEEM LELVKLGGLG GRYPHELSGG QQQRVALARA LAPEPQLLLL DEPFSNLDVE LRRRLSHEVR DILKSRGTSA ILVTHDQEEA FAVSDHVGVF KEGRLEQWDT PYNLYHEPQT PFVASFIGQG YFIRGQMSSH ESVNTELGEL RGNRAYTMAP GSSVDVLLRP DDIVPDADSA LRANIVGKSF LGASTLYRLQ LPTGSQLEAI FPSHIDHQVG EQVGITVKAD HLVLFPVPGS VAAQLPRQEN GVRRFSSAT
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