Gene PputW619_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1107 
Symbol 
ID6110026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1226928 
End bp1228037 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content63% 
IMG OID641620872 
ProductABC transporter related 
Protein accessionYP_001747981 
Protein GI170720293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCAC CCCTACTGCT AAACCTGCGC AACCTCGCCT GCGGCTACGG CGACCAGCGC 
ATCGTCCAGA ACCTCAACCT GCACCTGAAC GCAGGCGACA TCGGTTGCCT GCTGGGTTCT
TCGGGGTGCG GCAAGACCAC CACCCTGCGC GCCATCGCCG GCTTCGAGCC GGTACACGAA
GGTGAGATCC AGCTCGCGGG CGAAGTCATT TCCCGCGCCG GTTTCACCCT GTCCCCGGAG
AAACGCCGCA TAGGCATGGT GTTCCAGGAC TATGCGCTTT TCCCGCACCT GACCGTGGCG
CAAAACATCG CCTTCGGCAT CGCCAAGCAC CCATCCCAAG GGCATGTGGT CGAAGAAATG
CTCGAGCTGG TCAAGCTCGG TGGCCTCGGC GGGCGGTATC CGCACGAGCT CTCAGGCGGC
CAGCAACAGC GCGTGGCCCT GGCCCGGGCG CTGGCGCCCG AGCCACAATT GCTGCTGCTG
GACGAGCCTT TTTCCAACCT GGACGTCGAA TTGCGCCGCC GCCTGAGCCA CGAGGTCCGT
GACATCCTCA AAAGCCGGGG TACCAGTGCG ATTCTGGTTA CCCATGACCA GGAAGAAGCC
TTCGCGGTCA GCGACCATGT GGGTGTGTTC AAGGAAGGCC GCCTGGAACA ATGGGACACG
CCCTACAACC TCTACCATGA GCCGCAGACA CCATTCGTTG CCAGTTTCAT CGGCCAGGGT
TATTTCATCC GTGGTCAGAT GAGCAGCCAT GAGTCAGTCA ACACCGAGCT CGGTGAACTG
CGGGGTAACC GCGCCTACAC CATGGCCCCC GGCAGCTCGG TAGACGTGCT GCTGCGCCCT
GACGATATCG TTCCTGACGC GGACAGCGCA CTGCGCGCAA ACATCGTCGG CAAGAGTTTC
CTGGGCGCAT CGACACTGTA TCGCCTGCAG TTGCCGACAG GCAGCCAGCT GGAAGCGATC
TTCCCGAGCC ATATCGATCA TCAGGTAGGC GAGCAGGTCG GTATTACCGT CAAAGCTGAC
CACCTGGTGT TGTTCCCGGT ACCCGGCAGC GTCGCGGCGC AGTTGCCGCG GCAGGAAAAC
GGGGTGCGCC GCTTCAGCTC GGCAACCTGA
 
Protein sequence
MSPPLLLNLR NLACGYGDQR IVQNLNLHLN AGDIGCLLGS SGCGKTTTLR AIAGFEPVHE 
GEIQLAGEVI SRAGFTLSPE KRRIGMVFQD YALFPHLTVA QNIAFGIAKH PSQGHVVEEM
LELVKLGGLG GRYPHELSGG QQQRVALARA LAPEPQLLLL DEPFSNLDVE LRRRLSHEVR
DILKSRGTSA ILVTHDQEEA FAVSDHVGVF KEGRLEQWDT PYNLYHEPQT PFVASFIGQG
YFIRGQMSSH ESVNTELGEL RGNRAYTMAP GSSVDVLLRP DDIVPDADSA LRANIVGKSF
LGASTLYRLQ LPTGSQLEAI FPSHIDHQVG EQVGITVKAD HLVLFPVPGS VAAQLPRQEN
GVRRFSSAT