Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1087 |
Symbol | |
ID | 6110006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1195796 |
End bp | 1196341 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620852 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_001747961 |
Protein GI | 170720273 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAC ATTCCGCCCA CGACCCTTTC GAACGCCGCC CCGGCCGGGG TGAACGCGGA CCAAGGGTAT TCGCTCCCGG CGACCTCAAA CTGTTGATGC TGTCGCTGCT GGCCGAGCAA CCTGGCCACG GCTATGACCT GATCCGCCAG ATCGAGAACC TGTTCGATGG CAGCTACACG CCCAGCCCCG GGGTCATCTA CCCCACCCTC AACTTTCTCG AGGAAGCAGA GCTGATCAGC GGCCAGGTGC AAGGTAGCAA ACGCCTCTAC GCCATTACCC AGGCCGGCCG TACCGCCTTG GCTGAACAAG CCGTGGCGCT GGACGGCGTG CGCATGCGCA TCGAAGTCAG CAAGCGCGCC CTGCGTGGCC ACGACCGTCC GCCAGAAATT CACGAAGCGG TCGGCAACCT GCGCCATGCC CTGCACATGC ACAGCGGCCG CTGGGCGCCG GACGAAATCG AACGGGTCCG CACCCTGCTC AACGACACTG CCAAGGCCAT CGCCGCCGGG CCGGCCGCCC CTGCTAAGGA GAACCTCCAT GAGTGA
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Protein sequence | MREHSAHDPF ERRPGRGERG PRVFAPGDLK LLMLSLLAEQ PGHGYDLIRQ IENLFDGSYT PSPGVIYPTL NFLEEAELIS GQVQGSKRLY AITQAGRTAL AEQAVALDGV RMRIEVSKRA LRGHDRPPEI HEAVGNLRHA LHMHSGRWAP DEIERVRTLL NDTAKAIAAG PAAPAKENLH E
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