| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0933 |
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| Symbol | |
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| ID | 6109850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1025373 |
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| End bp | 1027190 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641620697 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_001747807 |
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| Protein GI | 170720119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT GCCTGCGGCT GCTCACAGCC CTCTGCCTCG CTGCCCTGCT GGCAGCCTGC
GCCAGCTCGC CCTCATCCAG CCTCGGAGAG CTGCCACGCA CGCCGGACGC CAGCATCGAG
CAGCTGCTCG AAAAAGCGGC GGCCAGCACG TCTGCCGAAG ATGCCGCCCT GCTGCGCCTG
AGCGCTGCCG ACCTGGCCTA CAAGCAGAAG GACTACCCGC GCGCCGCACG CATTCTCGAG
CAGGTCCCCA TGGATACGCT CAAGCCCGCC CAACAGATCT TCGCCGCCAC ACTTGGCGCC
GAACTGGCCA TGAGCCGCAA CCAGCCCAAA GCCGCCCTTA GCGCCCTCTC GCACACCAGC
CTGCAGCACC TCGCCCAATT GCCGGCAGAG CAGCAAGTGC GCACCTATGG CGTCCACGCC
GCCGCTCTTG AAGCCGACGG TCAGGCCCTG GCCGCAGCAC AACAGCGCGT AATGCTGACC
CCGCTGCTCA GCGGCCAGGC TGCCAGCGCC AACAATGACG CGATCTGGGC CTTGGTCGCC
TCGCTGCCGG CAGAGCAACT GCAGCAGCCA GCTGACAACC AGACCCTGGC CGGCTGGACG
AGCCTGGCCT TGGCCGTAAA AAGCGCCGGC ACTCTGGAGC AGCAGCAGGC CGCCATCGAA
ACCTGGCGCA AACAGCACCC CGACCACCCC GCAGCACAGC AGCTGCCATC GGCCTTGGTC
AAGCTCAAGG AACTGGCAAG CCAACCGCTG ACCAAGATCG GCCTGCTGCT GCCCCAGGAA
GGCCCGCTCG CCGGTGTTGC CCGTGCCCTG CGTGACGGCT TCATGGCCGC GCACTTCCAG
GCCCAGCAAG CCGGCCAGCA AGCGCCGGCC GTACAGGTAT ACGACAGCTC ACGCATCGGC
TCGCTGGACG ACTTCTATCG TCAGGCCCAG GCCGATGGCG TACAACTGGT AGTCGGCCCG
CTGGAAAAAG CGCTGGTAAA AAAACTGGCC GCCAATGCGC AGCTGCCTAT CACGACTCTC
GCCCTGAATT ACGCCGACGC CGGCCAGAAC GCCCCGCCAC AACTGTTCCA GTTCGGCCTG
GCGGCCGAAG ACGAAGCCCG CGAAGTCTCG CGCCGCGCCC GCGCCGACGG CATGGTTCGC
GCGGTGGCCC TGGTGCCGAG CGGTGAATGG GGCGACCGCG TGCTTGCCGC GTTCCGCCAG
GACTGGGAAG GCAATGGCGG CACCATCATC GCCGCGGAAC GCATCGCCCA GCCGGTCGCC
CTGGCCCAGC AGATCGCCAA CCTGTTCCAG CTGCGCCAGA GCGAAGGCCG CGCACAGAGC
CTGCAGAGCA CCGTGGGCGG CACCATTGCC GCACAACCAT CGCGTCGCCA GGACATCGAC
TTCATCTTCC TCGCCTCGAC CCCGCAACAG GCGCAGCAGA TCAAACCGAC CCTGAACTTC
CAGTACGCTG GCGACGTTCC GGTCTACGCC ACCTCGAACC TCTACAGCGC CAGCGGTGAC
GTCAACCAGT ACAACGACAT GAACGGCATT CGTTTCTGCG AAACCCCGTG GCTGCTCGAC
ACCACCAACA ACCTGCGCCA GCAGGTGGTT CAGCAGTGGC CACAAGCCGC TGGCAGTCTC
GGCCGCCTGT ATGCCATGGG TGTAGACGCC TATAGCCTGG CGCCTCGCCT GGGTCAGCTC
AAAGCATTGC CGGACAACCG TGTACAGGGC CTTTCCGGCA GCCTGAGCAT GAGCGCCAGC
CAGCGCATCG AGCGCCAGCT GCCGTGGGCT GAATTCTCTG GCGGCCAGGT CAAGCGCCTG
CCCGATACCA TCCGCTGA
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| Protein sequence | MIACLRLLTA LCLAALLAAC ASSPSSSLGE LPRTPDASIE QLLEKAAAST SAEDAALLRL
SAADLAYKQK DYPRAARILE QVPMDTLKPA QQIFAATLGA ELAMSRNQPK AALSALSHTS
LQHLAQLPAE QQVRTYGVHA AALEADGQAL AAAQQRVMLT PLLSGQAASA NNDAIWALVA
SLPAEQLQQP ADNQTLAGWT SLALAVKSAG TLEQQQAAIE TWRKQHPDHP AAQQLPSALV
KLKELASQPL TKIGLLLPQE GPLAGVARAL RDGFMAAHFQ AQQAGQQAPA VQVYDSSRIG
SLDDFYRQAQ ADGVQLVVGP LEKALVKKLA ANAQLPITTL ALNYADAGQN APPQLFQFGL
AAEDEAREVS RRARADGMVR AVALVPSGEW GDRVLAAFRQ DWEGNGGTII AAERIAQPVA
LAQQIANLFQ LRQSEGRAQS LQSTVGGTIA AQPSRRQDID FIFLASTPQQ AQQIKPTLNF
QYAGDVPVYA TSNLYSASGD VNQYNDMNGI RFCETPWLLD TTNNLRQQVV QQWPQAAGSL
GRLYAMGVDA YSLAPRLGQL KALPDNRVQG LSGSLSMSAS QRIERQLPWA EFSGGQVKRL
PDTIR
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