| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0915 |
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| Symbol | |
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| ID | 6109832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1010785 |
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| End bp | 1011978 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620679 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001747789 |
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| Protein GI | 170720101 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.230127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACT CCCATAACAA CACCGGTTTT TCCACACGTG CCATTCACCA TGGCTACGAT
CCGCTTTCCC ACGGTGGCGC GCTGGTGCCG CCGGTGTACC AGACCGCTAC CTATGCCTTC
CCGACCGTCG AATACGGTGC TGCCTGCTTC GCCGGGGAGG AGGCGGGGCA CTTCTACAGC
CGCATCTCCA ACCCCACCCT GGCCTTGCTT GAGCAGCGCA TGGCCTCGCT GGAGGGCGGT
GAGGCGGGAT TGGCGCTGGC GTCGGGGATG GGCGCCATCA CTTCGACCAT CTGGACCCTG
CTGCGGCCTG GCGATGAACT GATCGTCGGG CGCACCTTGT ATGGCTGCAC CTTCGCGTTC
CTGCACCATG GCATCGGCGA GTTCGGGGTC AAGATTCACC ATGTCGACCT TAACGATGCC
AAGGCCCTGA AAGCGGCGAT CAACGGCAAA ACGCGGATGA TCTACTTCGA AACGCCGGCC
AACCCCAACA TGCAACTGGT GGATATAGCG GCGGTCGTCG AGGCAGTGCG AGGCAGTGAT
GTGCTTGTGG TGGTCGACAA CACCTACTGC ACGCCTTATC TGCAGCGGCC GCTGGAGCTC
GGGGCGGACT TGGTGGTGCA TTCGGCGACC AAGTACCTCA GTGGCCATGG CGACATTACC
GCCGGCCTGG TGGTGGGGCG CAAGGCGCTG GTCGACCGCA TTCGCCTGGA AGGGCTGAAA
GACATGACCG GGGCTGTACT TTCGCCGCAT GACGCTTCGC TATTGATGCG CGGTATCAAG
ACCCTTGCAG TGCGCATGGA CCGGCACTGC GCCAATGCAC TGCAGGTGGC GCAGTTCCTG
GCTCGGCAGC CGCAGGTGGA GCTGATTCAC TACCCGGGGT TGCCGTCGTT TGCCCAGTAC
GAACTGGCAC AGCGGCAGAT GTGTTTGCCG GGCGGGATGA TTGCCTTTGA GCTTAAGGGC
GGGATCGAGG CCGGGCGACG CTTCATGAAT GCGCTGCAAC TGTTTGCCCG TGCGGTAAGC
CTGGGGGATG CCGAGTCGCT GGCGCAGCAC CCGGCGAGCA TGACGCACTC CAGTTACACG
CCGCAGGAGC GGGCCCATCA TGGGATATCG GAAGGGTTGG TGCGGTTGTC GGTGGGGCTG
GAGGATGTGC AAGACCTGCT GGCGGACATC GAGCAGGCGC TGGGGCATCT GTAG
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| Protein sequence | MRDSHNNTGF STRAIHHGYD PLSHGGALVP PVYQTATYAF PTVEYGAACF AGEEAGHFYS
RISNPTLALL EQRMASLEGG EAGLALASGM GAITSTIWTL LRPGDELIVG RTLYGCTFAF
LHHGIGEFGV KIHHVDLNDA KALKAAINGK TRMIYFETPA NPNMQLVDIA AVVEAVRGSD
VLVVVDNTYC TPYLQRPLEL GADLVVHSAT KYLSGHGDIT AGLVVGRKAL VDRIRLEGLK
DMTGAVLSPH DASLLMRGIK TLAVRMDRHC ANALQVAQFL ARQPQVELIH YPGLPSFAQY
ELAQRQMCLP GGMIAFELKG GIEAGRRFMN ALQLFARAVS LGDAESLAQH PASMTHSSYT
PQERAHHGIS EGLVRLSVGL EDVQDLLADI EQALGHL
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