| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0781 |
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| Symbol | |
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| ID | 6109698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 872556 |
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| End bp | 873161 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641620545 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_001747655 |
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| Protein GI | 170719967 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.80692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAATCG AACTGCTGCC GGAAACCCCC TCGCAGACCG CCGGCCCCTA CGTGCACATC
GGCCTGGCAC TGGAAGCGGC CGGTAACCCT ACCCGTGACC AGGAAATCTG GAACCGCATG
GCCAAGCCAG AGGCGCCGGG TGAACACATC CTGTTGATCG GTCATGTATA CGACGGTAAC
GGCCACTTGA TTCGCGATTC GTTCCTTGAG CTCTGGCAAG CCGATACCAA CGGCCAGTAC
CAAGATGACT ACAACTTGGA GAACGCCTTC AACAGCTTCG GTCGTACTGC CACCACCTTC
GATGCCGGTG AGTGGACCGT CCAGACCGTC AAGCCCGGCG TGGTGAACAA CGCTGCCGGT
GTCCCGATGG CCCCGCACAT CAACATCAGC CTGTTTGCCC GCGGCATCAA TATCCACTTG
CACACGCGGC TGTATTTCGA TGATGAGGCC GAAGCGAACG CCAAGTGCCC GGTGCTCAAC
CTTATCGAGC AGCCACAGCG CCGTGAAACC TTGATTGCCA AGCGTTGCGA GGTGGACGGC
AAGACGGCGT ATCGTTTCGA TATCCGTGTT CAGGGGGAAG GGGAGACAGT TTTCTTCGAC
TTCTGA
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| Protein sequence | MPIELLPETP SQTAGPYVHI GLALEAAGNP TRDQEIWNRM AKPEAPGEHI LLIGHVYDGN
GHLIRDSFLE LWQADTNGQY QDDYNLENAF NSFGRTATTF DAGEWTVQTV KPGVVNNAAG
VPMAPHINIS LFARGINIHL HTRLYFDDEA EANAKCPVLN LIEQPQRRET LIAKRCEVDG
KTAYRFDIRV QGEGETVFFD F
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