| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0762 |
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| Symbol | |
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| ID | 6109679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 852136 |
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| End bp | 854211 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641620526 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001747636 |
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| Protein GI | 170719948 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.089759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA CCCTTGATGA CCTCTTGCCT ACCCCACTGA ACGCAGAGCA CTTGCTGAGG
CTGGCGCCAC AACGCAACAG CGCAGACCTG CTGCAACTGC TCGACCGCTG GGTTGAGCGT
GGCTGGTTGC GGGCCTTGGA CCGGGCATTC GTGTCCTTTC TGGAAGAGCG CGCACCCGGG
AGCGATCCGC TCTTGCTGCT GGCCGCTGCG TTGGCCAGCC ATCAACTGGG CCATGGGCAT
GTCTGCCTGG ACCTGCAGCA AACCCTTGCC GAGCCGGATT TCGCCCTGTC GTTGCCACCG
GAAGGTGATG CCCTGGCTGG CCCCTTGCTG CTGCCCTCAC AATTGCTCGC CAACCTCGAC
CTGCACACCT GGCGCCAGCG GATTGCTGCC AGCCCCCTGG TTGCTGTTGG CAATACCTCG
GGCCAGCACT CACGGCCATT GGTGATCAGC GGCGAGCGCC TCTACCTGCG CCGCTACTGG
AGTTATGAGC GGCAGATCGA CGAAACCCTG CGCCAGCGCC TGAGCCAGGA CGAGGCTCCC
CCAAAAGACC TGCCCGCGCG CCTGGCGCAG CTGTTCGACG AAGGTGCTCT GCCAGGCCAG
GTGGATTGGC AGAAACTGGC TTGCGCCCTG GCCACCCGCG CCGGCTTCAG CATCATCACC
GGGGGGCCGG GCACCGGCAA GACCACCACG GTGGTGCGCC TGCTGGCCTT GCTGCAGGCT
CCTGCGGTAG AGCAGGGCAG GCCGCTGCGC ATTCGCCTCG CAGCGCCCAC CGGCAAGGCT
GCAGCACGCC TGACCGAATC CATTGGTCAG CAGGTCGAGC GCTTGCAGAT GAGTGCGGAT
GTCCGCGGGC AGATTCCAAC CGATGTCAGC ACCGTGCACC GGCTGCTCGG CAGCCGTCCG
GGGTCGCGGC ACTTCCGCCA CCATGCAGGC AACCCGCTGC CGCTGGATGT GCTGGTGGTG
GATGAAGCGT CGATGATCGA CCTCGAAATG ATGGCCAACC TGCTCAATGC CTTGCCACCC
AAAGCCCGGT TGATCCTGCT GGGGGACAAG GACCAGCTGG CCTCGGTCGA GGCGGGCGCG
GTGCTGGGCG ACCTGTGCCG GGATGCCGAA GAGGGCTGCT ACTCACCCGC TACCCAGGCA
TGGCTGGAGC AGATTGGCGG TCAGTCGCTG GCCGACAGTG GCCTGAAGGC CGGCGACGCG
CAACGCAATC CATTGGCCCA GCAGGTGGTG ATGCTGCGTT TTTCCCGGCG CTTTGGCGAA
GGCAGCGGCA TCGGCCAGCT GGCGCGGCTG GTCAACCGCC AGCAAGCCCA GGCGGCCCGC
GACCTGTTGA CCAGGCCACC GGCCGATGTA TTCGGCCTGG CCCTGCGCGG CGAGCACGAC
CGTGCCTTCG ATCGGCTGAT ACTGGACGGT CTGAACCGTG GCGCTGAGGG GCCACAAGGC
TATCGTAGCT ATTTGCGTAC CATTGGCCGC TATCGTCCAG CGCTTGGCAG TGCCTTTGAC
GATCCGCAAT GGGAGCAGTG GGCTGGCAAG GTGCTGCGCA GCTTTGAGGA CTTCCAGTTG
CTGTGCGCGG TGCGCAAGGG CGCCTGGGGG GTTGAAGGCC TCAACGAGCG GGTGGCGCGA
GTGCTGCACA GCGCCGGGTT GATCGACAGC CAGCAGCCCT GGTACGAAGG GCGCCCGGTC
CTGGTGACGC GTAACGACTA CGGCCTGGGC CTGATGAACG GTGACATCGG CATCGCCCTG
CGCTTGCCGG ACGAGCAGGG CGAGCCGCTG CTGCGCGTGG CCTTCCCACG CAACGACGGC
AGTGGCGGGG TGCGTTTCGT GCTGCCCAGC CGGCTCAACG AGGTGGAAAC GGTGTTCGCC
ATGACCGTTC ACAAGTCCCA AGGCTCTGAG TTCAGCCACA CCGCGCTGGT ACTGCCGGAT
GCGCTCAACC CGGTGCTGAC CAAGGAGCTG ATATACACCG GTATTACCCG GGCCAAGCAT
TGCTTCAGCC TGGTCGAACC ACGGCAGGGC ATCTTCGAAG GAGCGGTCGC ACGCAAGGTA
CGGCGTATCT CCGGGTTGAT GCTCGAACAG GTGTGA
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| Protein sequence | MSRTLDDLLP TPLNAEHLLR LAPQRNSADL LQLLDRWVER GWLRALDRAF VSFLEERAPG
SDPLLLLAAA LASHQLGHGH VCLDLQQTLA EPDFALSLPP EGDALAGPLL LPSQLLANLD
LHTWRQRIAA SPLVAVGNTS GQHSRPLVIS GERLYLRRYW SYERQIDETL RQRLSQDEAP
PKDLPARLAQ LFDEGALPGQ VDWQKLACAL ATRAGFSIIT GGPGTGKTTT VVRLLALLQA
PAVEQGRPLR IRLAAPTGKA AARLTESIGQ QVERLQMSAD VRGQIPTDVS TVHRLLGSRP
GSRHFRHHAG NPLPLDVLVV DEASMIDLEM MANLLNALPP KARLILLGDK DQLASVEAGA
VLGDLCRDAE EGCYSPATQA WLEQIGGQSL ADSGLKAGDA QRNPLAQQVV MLRFSRRFGE
GSGIGQLARL VNRQQAQAAR DLLTRPPADV FGLALRGEHD RAFDRLILDG LNRGAEGPQG
YRSYLRTIGR YRPALGSAFD DPQWEQWAGK VLRSFEDFQL LCAVRKGAWG VEGLNERVAR
VLHSAGLIDS QQPWYEGRPV LVTRNDYGLG LMNGDIGIAL RLPDEQGEPL LRVAFPRNDG
SGGVRFVLPS RLNEVETVFA MTVHKSQGSE FSHTALVLPD ALNPVLTKEL IYTGITRAKH
CFSLVEPRQG IFEGAVARKV RRISGLMLEQ V
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