Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0651 |
Symbol | |
ID | 6109560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 708291 |
End bp | 709052 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620408 |
Product | putative periplasmic ligand-binding sensor protein |
Protein accession | YP_001747525 |
Protein GI | 170719837 |
COG category | [S] Function unknown |
COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0121989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.250883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTG AAGAACAAAC CCTGATCGAT GGCCTGTTTG GCCGCATCAA ACAAGCCGAA GACCCCAGCC AGCCGCGTGA TGCACAGGCC CAGGCGCGCA TCGAGGAACA CCTGCGCGAG CAGCCGGCGG CGCCTTACTA CATGGCCCAG GCAATCCTGG TACAGGAAGC GGTGCTCAAG CGCCTGGACG AACAGAACAA GCAACTGGAA GCAGAGCTCA AACAGGCTCG TGCCCAGGTC GAGGCTTCCC GCACCAGCAG CACCAGCAGC ACCAGCAGTG GTGGCTTCCT CTCCAGCATC TTTGGCGCCA GTGGGCGTAA TCCGCAGCCT GCCCAACCAT CACAGCAGCC CCAGCGGCCT GCCACGCCGG TCGCTTCGGC AGGCGGTTGG CGGGAGCCGA GTGCCCCGGG CTTCTCCCAG CCGCAGGCGG CGCAACCTGG TTTCGGCGCC GCGCCGGCTC GGGGTGGTGC CAGCAGCTTC CTGGGCGGCG CAATGCAGAC CGCTGCCGGT GTGGCCGGTG GTGTGTTGCT GGCACAAGGC ATCAGCAGCC TGTTCAACCA CCACTCGCAG CCTGAAGAGG TGGTCGAGGT GATCAAGGAA GAACCGGCCC CGGCCAGTGA TACCGCGGGT TGGAACGACG AGGGCGCGCA GTCGCAGGTG GCCGACAATG GTGGCTGGGG CGCTGATCAG GGTGGTTTCG CTGACAGCGA TTATGGCAGC GATGATGGCG GCTTCTTCTC GGACGACGAC ACCTTCGTCT GA
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Protein sequence | MNTEEQTLID GLFGRIKQAE DPSQPRDAQA QARIEEHLRE QPAAPYYMAQ AILVQEAVLK RLDEQNKQLE AELKQARAQV EASRTSSTSS TSSGGFLSSI FGASGRNPQP AQPSQQPQRP ATPVASAGGW REPSAPGFSQ PQAAQPGFGA APARGGASSF LGGAMQTAAG VAGGVLLAQG ISSLFNHHSQ PEEVVEVIKE EPAPASDTAG WNDEGAQSQV ADNGGWGADQ GGFADSDYGS DDGGFFSDDD TFV
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