Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0626 |
Symbol | |
ID | 6109535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 682008 |
End bp | 682613 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620383 |
Product | rare lipoprotein B |
Protein accession | YP_001747500 |
Protein GI | 170719812 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.544566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC GCAATCTGCT GGTATTGGGC CTGGCCATCA TGCTCAGCGC CTGCGGTTTC CAGCTGCGCG GCACCGGCAC CTCCGAGCTC AGCGTCAAGG AAATGGACGT CAGTGCACGT GATGCCTACG GCCCGACCGT GACTCAACTG CGCGAAGTAC TGGAGCGCAG CGGCGTCAAT GTGCACACCG GCGCCCCGTA TCGCCTGGTA CTGACCAACG AACAGCAAAC CCAGCGCGCA GCGTCCTACG CCAGCAGCAA CCAATCTGCC GAGTACGAAC TGACCACAGT GCTCAGCTAC AGCATCCTTG GCCTGAACAA CCTGGAGCTG ATGAGCGACA AGCTGGAAGT GCGCAAAATC TATGTACGCG ACGGCGGTAA CATCACCGGC TCCGACCAGG AAGCCACTGT TGCCCGCGAA GAAATGCGCC GCGACCTGGT CAACGCCATG GTCGTGCGCC TGCAGATGCT GACCCCGCCT CAGCTGGACC AGTTGCAGCG CGAAGCTGAC GAACGCGCCA AGGCCGAAGC CGCCGCACTG GAGGCTGCGC GCAGCCAGCA GGCGGAAACG CCGCAGCAAT CGCCGCTGGA AATTCCGGGC AATTAA
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Protein sequence | MIKRNLLVLG LAIMLSACGF QLRGTGTSEL SVKEMDVSAR DAYGPTVTQL REVLERSGVN VHTGAPYRLV LTNEQQTQRA ASYASSNQSA EYELTTVLSY SILGLNNLEL MSDKLEVRKI YVRDGGNITG SDQEATVARE EMRRDLVNAM VVRLQMLTPP QLDQLQREAD ERAKAEAAAL EAARSQQAET PQQSPLEIPG N
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