| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0605 |
|---|
| Symbol | |
|---|
| ID | 6109514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 662790 |
|---|
| End bp | 663152 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641620362 |
|---|
| Product | LrgA family protein |
|---|
| Protein accession | YP_001747479 |
|---|
| Protein GI | 170719791 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGC GTGGTTTGAC CTGGCTGGTG CTGTTCCAGC TGCTGGGTAC GGCGTTCAAT
CATCTGTTGG TGCCGATACT GCCCGGGCCG ATCATCGGCC TTTTGCTCTT GTTGTTGTTC
CTCATGGCCC GCGGTGAGGT CGGCAAGCCG TTGAACGAGG CGGCGAGCAG CCTGTTGCGC
TACCTGCCGC TACTGTTGGT GCCGCCAGCA GTAGGTGTGA TGGTGTATGC CAAGGATATC
GCTGCAGACT TCTGGGCCAT CGCCGGCGCG CTTTTGATCT CCTGCCTGGC CACCTTGGTC
TTTGTCGGGG TATTGATGCA GAAACTCATG CATCGCCAGG GCAAGCGCGG GGAGCAGCCA
TGA
|
|---|
| Protein sequence | MLLRGLTWLV LFQLLGTAFN HLLVPILPGP IIGLLLLLLF LMARGEVGKP LNEAASSLLR
YLPLLLVPPA VGVMVYAKDI AADFWAIAGA LLISCLATLV FVGVLMQKLM HRQGKRGEQP
|
|---|
| |