Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0501 |
Symbol | |
ID | 6109409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 548607 |
End bp | 550604 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620257 |
Product | transketolase |
Protein accession | YP_001747375 |
Protein GI | 170719687 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCC GTCGTGAACG TGCCAACGCC ATTCGTGCAC TCAGCATGGA TGCCGTGCAA AAGGCCAACA GCGGCCACCC AGGTGCCCCC ATGGGCATGG CGGATATCGC CGAAGTGCTT TGGCGCGACT ATCTGAAGCA CAACCCGAGC AACCCGAGCT TCGCCGACCG TGACCGCTTC GTGCTGTCCA ACGGCCACGG CTCGATGCTG ATCTACTCGC TGCTGCACCT GACCGGCTAC GACGTCACCA TCGACGACCT CAAGTCGTTC CGCCAGTTGC ATAGCCGTAC CCCGGGCCAC CCCGAGTTCG GCTACACCCC AGGTGTGGAA ACCACCACCG GCCCGCTGGG CCAAGGTTTG GCCAACGCCG TGGGCTTTGC TTTGGCTGAG AAAGTGCTGG GTGCCCAGTT CAACCGCGAA GGCCACAATA TCGTCGACCA CAACACTTAC GTGTTCCTCG GCGACGGCTG CATGATGGAA GGTATCTCCC ACGAAGTCGC CTCGCTGGCC GGCACCCTGG GCCTGAACAA GCTGGTTGCC TTCTATGACG ACAACGGCAT CTCCATCGAC GGTGAAGTGG AAGGCTGGTT CACCGACGAC ACGCCCAAGC GTTTCGAGGC CTACAACTGG CTGGTGATCC GCAACGTCAA CGGCCACGAC GCCGACGAGA TCCGCACGGC CATCGAGACT GCGCGCAAGA GCGACCGTCC GACCCTGATC TGCTGCAAGA CCATCATCGG TTTCGGCTCG CCCAACAAGC AGGGCAAGGA AGACTGCCAC GGTGCTCCAC TGGGCAACGA CGAAATCGCC CTGGCCCGCA AGGAGCTGAA CTGGAACCAC GCTCCGTTCG AAGTTCCTGC CGACATCTAC GCCGAATGGA ATGCCAAAGA AGCAGGCGCC AAGGCTGAAG CCGAGTGGAA CACGCGTTTC GAGGCCTATG CCGCCGCCTT CCCGGAACTG GCCAGCGAGC TCAAGCGCCG TCTGAGCGGT GACCTGCCGG CCGACTTCTC GGAAAAAGCC GCTGCCTACA TCGCTGAAGT CGCTGCCAAG GGCGAGACCA TCGCCAGCCG CAAGGCCAGC CAGAACACCC TGAACGCCTT CGGCCCACTG CTGCCGGAAT TCCTTGGCGG CTCGGCCGAC CTGGCCGGCT CCAACCTGAC CCTGTGGAAG GGTTGCAAGG GTGTGGACGC CAACGACGCC AGCGGCAACT ACGTGTTCTA CGGCGTGCGC GAGTTCGGCA TGACCGCGAT CATGAACGGC GTCGCCCTGC ACGGCGGCCT GGTGCCTTAC GGCGCGACGT TCCTGATGTT CATGGAATAC GCCCGTAACG CCGTGCGCAT GTCCGCCCTT ATGAAGCAGC GCGTCATCCA TGTGTACACC CACGACTCCA TCGGCCTGGG CGAAGACGGC CCGACCCACC AGCCGATCGA GCAACTGACC AGCCTGCGCA GCACGCCGAA CCTGGACACC TGGCGCCCGG CCGACGCAGT CGAGTCGGCT GTGTCCTGGA AGCACGCCCT GGAGCGCAAG GACGGCCCTT CGGCGCTGAT CTTCTCGCGT CAGAACCTGC AGCATCAGGA CCGCGACGCC CAGCAGATCG CCGATATCGC CCGCGGCGGT TACGTGCTCA AGGACTGTGC CGGCGAGCCT GAGTTGATCC TGATCGCCAC CGGCTCGGAA GTGGGCCTGG CCGTTCAGGC GTTCGACAAG CTGACCGAGC AGGGCCGCAA GGTGCGTGTC GTGTCGATGC CGAGCACCAG CGTGTTTGAC GCCCAGGATG CGGCCTACAA GCAGTCCGTA CTGCCGCTGC AAGTGGGTGC CCGCATCGCC ATCGAAGCGG CTCATGCCGA CTTCTGGTAC AAGTACGTGG GTCTCGAAGG CCGTGTCATC GGCATGACCA CTTACGGTGA ATCGGCTCCG GCCAGTGCAC TGTTCGAGGA GTTCGGCTTC ACCCTGGAGA ACATCCTGGG TACTGCCGAA GAGCTGCTGG AAGACTGA
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Protein sequence | MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDYLKHNPS NPSFADRDRF VLSNGHGSML IYSLLHLTGY DVTIDDLKSF RQLHSRTPGH PEFGYTPGVE TTTGPLGQGL ANAVGFALAE KVLGAQFNRE GHNIVDHNTY VFLGDGCMME GISHEVASLA GTLGLNKLVA FYDDNGISID GEVEGWFTDD TPKRFEAYNW LVIRNVNGHD ADEIRTAIET ARKSDRPTLI CCKTIIGFGS PNKQGKEDCH GAPLGNDEIA LARKELNWNH APFEVPADIY AEWNAKEAGA KAEAEWNTRF EAYAAAFPEL ASELKRRLSG DLPADFSEKA AAYIAEVAAK GETIASRKAS QNTLNAFGPL LPEFLGGSAD LAGSNLTLWK GCKGVDANDA SGNYVFYGVR EFGMTAIMNG VALHGGLVPY GATFLMFMEY ARNAVRMSAL MKQRVIHVYT HDSIGLGEDG PTHQPIEQLT SLRSTPNLDT WRPADAVESA VSWKHALERK DGPSALIFSR QNLQHQDRDA QQIADIARGG YVLKDCAGEP ELILIATGSE VGLAVQAFDK LTEQGRKVRV VSMPSTSVFD AQDAAYKQSV LPLQVGARIA IEAAHADFWY KYVGLEGRVI GMTTYGESAP ASALFEEFGF TLENILGTAE ELLED
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