| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0459 |
|---|
| Symbol | |
|---|
| ID | 6109367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 502036 |
|---|
| End bp | 503718 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641620215 |
|---|
| Product | poly(R)-hydroxyalkanoic acid synthase, class II |
|---|
| Protein accession | YP_001747333 |
|---|
| Protein GI | 170719645 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.866835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA AACCGGCCAA AGGAACGACA ACGCTCCCCG CCATGAGCAT GAACGCACAG
AACGCGATCG TCGGCCTGCG CGGCCGCGAT CTGATTTCCA CGCTGCGCAA TGTTGGCCGC
CATGGTTTGC TCAACCCGTT GCATACCGCA CGCCACCTGC TCGCCCTGAG CGGCCAGCTG
GGTCGCGTGA TGCTCGGCGA CACGCCCTAC TCGCCAAGCC CGCGGGATGC GCGCTTCAGC
GATCCTACAT GGAGCCAGAA CCCGTTTTAC CGCCGTGGCC TGCAGGCCTA TCTGGCCTGG
CAGAAGCAGA CCCGCCTGTG GATAGATGAA AGCCACCTGG ACGACGATGA CCGGGCCCGT
GCGCATTTCC TGTTCAACCA GATCAACGAC GCCCTGGCAC CGAGCAACTC GTTGCTCAAT
CCGTTGGCGG TCAAGGAACT GCTCAATACC GGCGGGCAGA GCCTGGTGCG CGGCGTGGCA
CACCTGCTCG ATGACCTGCG CCACAACGAC GGCCTGCCGC GCCAGGTGGA TGAGCGGGCC
TTCGAAGTGG GCGGCAACTT GGCAGCAACT CCGGGCGCGG TGGTGTTTCG CAACGAGATG
CTGGAGTTGA TCCAGTACAA GCCGATGAGT GAAAAACAGC ACGCTCGGCC TGTGCTGGTA
GTGCCACCCC AGATCAACAA GTTCTATATC TTCGACATGC AGGCGAACAA CAGCTTCGTC
CAGTACATGC TCAAGAACGG TTTGCAAGTG TTCATGGTCA GCTGGCGCAA CCCCGACCCA
CGCCACCGCG AATGGGGCCT GTCCAGCTAC GTGGAGGCGC TTGAAGAGGC ACTCAACGCC
TGCCGCAGCA TCAGCGGCAA CCGCGACCCC AACCTGATGG GGGCCTGCGC CGGCGGCCTG
ACCATGGCCG CGCTGCAGGG CCACCTGCAA GCCAAGCACC AACTGCGCCG GGTGCGCAGC
GCCACCTACC TGGTCAGCTT GCTCGACAGC AAGTTCGACA GCCCCGCCAG CCTGTTCGCC
GACGAGCAGA CCATCGAAGC GGCCAAGCGC CGCTCTTATC AGCGCGGGGT ACTGGATGGC
AGCGAAGTGG CGCGTATCTT CGCCTGGATG CGGCCCAATG ACCTGATCTG GAACTACTGG
GTCAACAATT ACCTGCTGGG CAAAACGCCC CCTGCTTTCG ACATCCTCTA CTGGAACGCC
GACAGTACGC GCCTACCGGC TGCCCTGCAT GGCGAACTGC TGGACTTCTT CAAGCTCAAC
CCGCTCACCC ACCCCGCCGG GCTGGAAGTC TGCGGCACGC CCATCGACCT CAAGCAGGTC
AACCTCGACA GCTTTACCGT GGCCGGCAGC AATGACCACA TCACTCCATG GGATGCCGTG
TACCGTTCGG CCCTGCTGTT GGGCGGCGAG CGACGGTTCG TGCTGGCCAA CAGCGGGCAC
ATCCAGAGCA TCATCAACCC GCCCGGAAAC CCCAAGGCCT ACTACCTGGA CAACCCCAGG
CTATCGAGCG ACCCGCGGGC CTGGTTCCAC GATGCCAAGC GCAACGACGG CAGCTGGTGG
CCCCTGTGGC TGGAGTGGAT AACGCCACGT TCCGGTCCGC TCAAGGCGCC GAGGGTGGAG
CTGGGCAACG CAACCTACCC ACCGCTGGGC CCCGCGCCAG GCACCTATGT CCTGACCCGA
TGA
|
|---|
| Protein sequence | MKDKPAKGTT TLPAMSMNAQ NAIVGLRGRD LISTLRNVGR HGLLNPLHTA RHLLALSGQL
GRVMLGDTPY SPSPRDARFS DPTWSQNPFY RRGLQAYLAW QKQTRLWIDE SHLDDDDRAR
AHFLFNQIND ALAPSNSLLN PLAVKELLNT GGQSLVRGVA HLLDDLRHND GLPRQVDERA
FEVGGNLAAT PGAVVFRNEM LELIQYKPMS EKQHARPVLV VPPQINKFYI FDMQANNSFV
QYMLKNGLQV FMVSWRNPDP RHREWGLSSY VEALEEALNA CRSISGNRDP NLMGACAGGL
TMAALQGHLQ AKHQLRRVRS ATYLVSLLDS KFDSPASLFA DEQTIEAAKR RSYQRGVLDG
SEVARIFAWM RPNDLIWNYW VNNYLLGKTP PAFDILYWNA DSTRLPAALH GELLDFFKLN
PLTHPAGLEV CGTPIDLKQV NLDSFTVAGS NDHITPWDAV YRSALLLGGE RRFVLANSGH
IQSIINPPGN PKAYYLDNPR LSSDPRAWFH DAKRNDGSWW PLWLEWITPR SGPLKAPRVE
LGNATYPPLG PAPGTYVLTR
|
|---|
| |