| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0382 |
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| Symbol | |
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| ID | 6109162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 400786 |
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| End bp | 402492 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641620139 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001747257 |
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| Protein GI | 170719569 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGC TCAGCCAGCA AGGTGAGCCT GCGCTTTCCG GCACTCCGCA GCAGTGGCAT
GACGTCGATT GGCGTCGGGT TCAGCGGAAT GTCCGGGGAA TGCAGGTGCG AATTGCGAAG
GCTTGTCGGG AAGGCAAATG GCGCAAGGTT AAATCCCTGC AACGGATGCT TACCCACTCG
AAGTCGGCCA GATACTTGGC CGTACGGAGA GTCACGGAAA ATCAGGGAAG CCGCACGGCG
GGAGTCGATA GGCAACTCTG GGACACACCC AACGCTAAAT GGAATGCGGT TGGTCAGTTG
AAGACGCGGG GTTACCGGGC TCGGCCACTA CGGCGAGTCT ACATCCCGAA GTCGGATGGA
CGGGAACGCC CTCTGGGCAT ACCGACCATG ACGGATAGGG CCATGCAAGC ACTGTACATG
CTGGCCCTGT CTCCCATCGC AGAAACCCAG GGCGATCCGA ATAGCTACGG CTTTAGGATC
GAACGTTGTA CGGCGGATGC GATGGCGCAG CTCTTCCTGT GTCTTTCCAA ACAGGCTTCC
GCCTGTTGGG TTTTGGACGC AGACATCGAA GGGTTCTTCG ACAACATCAA CCATGAATGG
CTGTTAGGAA ACGCCCCTAC GGATAACCGG ATGCTTCGGC AGTGGTTGAA GGCTGGAGTC
ATCCACAAGG GGCAGTTGCA CGCAACGGAT GCAGGCACGC CACAAGGGGG AATTATCTCC
CCGGTGTTGG CGAATCTGGC ACTGGATGGT CTGGAAACAC TCCTCAAGCA ACACCTAGGA
GTGACAAGGG CGAAGAAGCT GAAGGTGAAT GTGGTGCGAT ACGCGGATGA TTTCGTGATT
ACTGGCACTT CCTCGGAAGT GCTGGAGAAC GAAGTAAAAC CTTGGGTAGA ACAGTTCCTC
GCGAAGCGTG GACTGCGGTT GTCACTCAAG AAAACGCGTA TTGCTCACAT CGACGAAGGC
TTCGACTTCC TTGGATGGAA TTTCCGGAAA TACGAAGGAA AGCTGCTGAT CAAACCGAGC
AAAAAGAACG TTAAAGCGTT CTACGGCAAG ATCAGGGAGG CAATCAACAC CCACAAGACG
AGTAAGCAAG AGGATCTAAT CCAACTGCTA AATCCGATGC TGAGGGGTTG GGCGCTATAC
CATCAGCCAG TGGTAGCCAA GCAAACGTAC AGCCGGATGG ACCACCGAGT GTTTGTAAAA
CTGTGGCGTT GGGCGAAACG GCGACATCCA AACAAGTCCC TCGACTGGGT TAGGAAGAAG
TACTTCCGAG CCTCCGGAGA ACGGAACTGG GTTTTCGCCA CCACGACAGT GGACGATGCT
GGGAGGAGAC GGGAGATCGA GCTTTGCTCG CTCGCGAGCA CGCCGATCGA GCGACACAAA
AAGGTGAGTG GGGATTACAA CCCTTATGAC CCTGCCATGG AGGCCCAAAG CGAAAAACTG
CGGATGGACC GGATGCTGAA AAAGCTGCAG TACCGGAAAC AAATCGGCAG CCTATACGCC
AGCCAAAACG GCCTGTGTTT GCTTTGCAAG CAACCGATCA CCAAGGAAAC GGGGTGGCAC
GACCACCACA TCATCCACCG GGCCGTTGAC GGTGGTGACG CCTTGGCCAA TCGGGTACTC
TTGCACCCCA ACTGTCATAA CCAGCTCCAC ACGCGTGGTC TGTACGTGAC CAAGCCGGCT
CCCCTTGGGG GCTTAAAGAA GGCTTGA
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| Protein sequence | MKELSQQGEP ALSGTPQQWH DVDWRRVQRN VRGMQVRIAK ACREGKWRKV KSLQRMLTHS
KSARYLAVRR VTENQGSRTA GVDRQLWDTP NAKWNAVGQL KTRGYRARPL RRVYIPKSDG
RERPLGIPTM TDRAMQALYM LALSPIAETQ GDPNSYGFRI ERCTADAMAQ LFLCLSKQAS
ACWVLDADIE GFFDNINHEW LLGNAPTDNR MLRQWLKAGV IHKGQLHATD AGTPQGGIIS
PVLANLALDG LETLLKQHLG VTRAKKLKVN VVRYADDFVI TGTSSEVLEN EVKPWVEQFL
AKRGLRLSLK KTRIAHIDEG FDFLGWNFRK YEGKLLIKPS KKNVKAFYGK IREAINTHKT
SKQEDLIQLL NPMLRGWALY HQPVVAKQTY SRMDHRVFVK LWRWAKRRHP NKSLDWVRKK
YFRASGERNW VFATTTVDDA GRRREIELCS LASTPIERHK KVSGDYNPYD PAMEAQSEKL
RMDRMLKKLQ YRKQIGSLYA SQNGLCLLCK QPITKETGWH DHHIIHRAVD GGDALANRVL
LHPNCHNQLH TRGLYVTKPA PLGGLKKA
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